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To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released

Python 1,602 264 Updated Oct 29, 2022

Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR

R 85 7 Updated Jun 28, 2024

TCR and BCR assembly from RNA-seq data

C 309 54 Updated Apr 30, 2025

An Emacs framework for the stubborn martian hacker

Emacs Lisp 20,469 3,110 Updated May 24, 2025

A Highly Opinionated List of Open Source Cheminformatics Resources

188 28 Updated Nov 19, 2020
Python 36 6 Updated May 23, 2022

Literate Programming in C/C++

CWeb 89 12 Updated Apr 30, 2025

GTP engine and self-play learning in Go

C++ 3,992 607 Updated May 17, 2025

SHOP3 Git repository

Common Lisp 153 15 Updated Mar 31, 2025

GUI for batch primer design with graphical output for PCR and SNP detection

Perl 17 7 Updated Jun 28, 2018

Primer design helpers for the Buckley lab

Perl 3 2 Updated Jul 20, 2012

AWS Launcher. Launch AWS Services from your macOS dock.

JavaScript 136 8 Updated Feb 14, 2019

Anno is a variant annotation tool

C++ 24 17 Updated May 18, 2016

GenomicsDB

C++ 111 28 Updated Jan 3, 2023

Extensible quality control dashboard built around FASTQ assessment.

JavaScript 4 1 Updated Jul 25, 2017

All code for reproducing reference graph bakeoff results

Python 9 6 Updated May 7, 2018

tools for working with genome variation graphs

C++ 1,190 205 Updated May 23, 2025

The CWEB System of Structured Documentation

C 29 11 Updated Nov 3, 2015

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

Perl 56 9 Updated Mar 29, 2021

Critbit trees in C

C 334 31 Updated Dec 17, 2021

Source code for pbrt, the renderer described in the third edition of "Physically Based Rendering: From Theory To Implementation", by Matt Pharr, Wenzel Jakob, and Greg Humphreys.

C++ 4,998 1,209 Updated Sep 3, 2023

method to estimate PCR duplication rate from high-throughput sequencing data

C 14 4 Updated Sep 22, 2017

The easiest music streaming server available

JavaScript 2,265 195 Updated Apr 7, 2025

Command and Telemetry Sequencer for NASA's Core Flight Executive

Haskell 4 Updated Nov 1, 2014

Optimization of a Haplotype PairHMM class for GPU processing

C++ 24 13 Updated Jan 31, 2017

Haskell to VHDL/Verilog/SystemVerilog compiler

Haskell 1,501 161 Updated May 24, 2025

Official repository of the AWS EC2 FPGA Hardware and Software Development Kit

SystemVerilog 1,565 523 Updated May 23, 2025

Type-safe, composable microservices for data analytics

Haskell 222 14 Updated Feb 7, 2024

C to Rust translator

Haskell 2,169 114 Updated Mar 10, 2019
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