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v0.31.2

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version 0.31.2

In addition to extracting reverse complement sequences via ~, can now extract complements via ~c~ and simple reverse with ~r~

v0.31.1

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update version to 0.31.1

Minor efficiency gain by using string instead of stringstream

v0.31.0

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Merge pull request #30 from pachterlab/lift

version bump 0.30.0 → 0.31.0

v0.30.0

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update version to 0.30.0

v0.29.4

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update zlib options

v0.29.3

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Version bump to 0.29.3

Allow spaces in arguments (e.g. config file can have spaces in it)

v0.29.2

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Version bump to 0.29.2

Changed 32-bit int to 64-bit int when getting number of mapped reads to avoid overflow when displaying progress of how many reads have been mapped

Fixed specifying no-chain in the config file (previously, it was not being recognized)

Allow no-chain to take in arguments about what should be chained vs not chained.

v0.29.1

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version 0.29.1: allow shorter final barcodes

v0.29.0

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update version to 0.29.0

v0.28.6

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Update runtests.sh
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