Stars
Export and Backup Ollama models into GGUF and ModelFile
Add support for `os.chmod('script.sh', 'ug+x')` syntax style.
Efficient handling of FASTQ files from Python
Download FASTQ files from SRA or ENA repositories.
Implementation of the Combinatorial Extension (cealign) algorithm to align protein structures
Web scraper with a simple REST API living in Docker and using a Headless browser and Readability.js for parsing.
Zoomable, animated scatterplots in the browser that scales over a billion points
All Algorithms implemented in Python
a pipeline to build similarity maps of protein space
A fast and compact library for writing text adventure games for the Z-machine running on 8-bit computers as well as other platforms.
A collection of software for protein structure prediction and design
Fair-code workflow automation platform with native AI capabilities. Combine visual building with custom code, self-host or cloud, 400+ integrations.
The Single Sign-On Multi-Factor portal for web apps, now OpenID Certified™
Aligns short reads using dynamic seed size with strobemers
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
A companion R package for the MicrobiomeAnalyst web server
Access large language models from the command-line
An R package to visualize chromosome scale repeat patterns and predict centromere locations.
You should offer both Podman and Apptainer with name spaces on your HPC systems
orchestration for singularity containers (under development)
CLI application to create ssh tunnels focused on resiliency and user experience.