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An R package to plot interactive three-way differential expression analysis
Clone of the Bioconductor repository for the ResidualMatrix package.
🧪 🕸️ webr + lit + vite npm template
BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version
R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)
GPT RStudio addins that enable GPT assisted coding, writing & analysis
Supporting data files and code for the publication by Shilts et al.
Single-Cell RNA Velocity Analysis on Yale HPC
upload big files to Zenodo using cURL, jq and bash
kevinrue / iSEE_custom
Forked from iSEE/iSEE_customExamples of custom panels for the iSEE package
Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-cell datasets.
Clone of the Bioconductor repository for the basilisk package.
Clone of the Bioconductor repository for the diffHic package.
Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.