8000 Release 2.2 by AntonPetrov · Pull Request #189 · r2dt-bio/R2DT · GitHub
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Release 2.2 #189

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Release 2.2 #189

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@AntonPetrov AntonPetrov commented Apr 27, 2025

This pull request introduces several updates across multiple files, focusing on Docker configuration, workflow triggers, and RNA data adjustments. The most significant changes include updates to .dockerignore and Dockerfile for improved build efficiency, enhancements to GitHub Actions workflow triggers, and modifications to RNA-related data files for accuracy and consistency.

Docker and Build Configuration Updates:

  • .dockerignore: Updated to include additional directories (tests/results, tests/html, data/local_data/*/) while removing outdated entries (data/cms, 1.4/, 2.0/). This optimizes the Docker build context by excluding unnecessary files. [1] [2]
  • Dockerfile: Changed BASE_IMAGE_VERSION from v2.1 to v2.2 and added commands to set up Rfam and CRW data directories, improving build reproducibility. [1] [2]
  • base_image/Dockerfile: Updated Ribovore_COMMIT to a newer version for dependency consistency.

Workflow Enhancements:

  • .github/workflows/main.yml: Added support for triggering workflows on tag pushes matching the pattern v* (e.g., v1.0), expanding automation coverage.

RNA Data Adjustments:

  • data/rfam/RF00016 and data/rfam/RF00023: Updated sequence and structure data in .fasta and .xml files to correct inaccuracies and improve alignment with current standards. [1] [2] [3] [4] [5]

anayden and others added 30 commits March 5, 2025 22:59
…gs-for-releases

Tag docker images on github tag creation
They were causing problems for the esl-sfetch step.
Update ribovore to the latest version
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github-actions bot commented Apr 27, 2025

Docker image tag(s) pushed:

rnacentral/r2dt:pr-189

Labels added to images:

org.opencontainers.image.created=2025-04-28T13:18:33.218Z
org.opencontainers.image.description=Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
org.opencontainers.image.licenses=Apache-2.0
org.opencontainers.image.revision=e585c0168ce2e70173a3dc688b566b96b82b9ed4
org.opencontainers.image.source=https://github.com/r2dt-bio/R2DT
org.opencontainers.image.title=R2DT
org.opencontainers.image.url=https://github.com/r2dt-bio/R2DT
org.opencontainers.image.version=pr-189

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