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Starred repositories

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Source code for JBrowse 2, a modern React-based genome browser

TypeScript 236 68 Updated May 23, 2025

Haplotype VCF comparison tools

C++ 430 125 Updated Dec 7, 2023

PyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf

Python 2,773 505 Updated Oct 23, 2024

libSQL is a fork of SQLite that is both Open Source, and Open Contributions.

C 14,714 383 Updated May 22, 2025

The official repository of Mozilla's Firefox web browser.

JavaScript 7,470 205 Updated May 23, 2025

Aggregate results from bioinformatics analyses across many samples into a single report.

JavaScript 1,302 619 Updated May 22, 2025

A list of interesting genome browser and genome visualization programs

TypeScript 964 122 Updated May 16, 2025

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,086 340 Updated May 19, 2025

A DSL for data-driven computational pipelines

Groovy 2,943 685 Updated May 23, 2025

Explore 5,000+ genomes in the terminal. Light, blazing fast 🚀, vim-motion.

Rust 268 9 Updated May 15, 2025

Tools (written in C using htslib) for manipulating next-generation sequencing data

C 1,728 591 Updated May 22, 2025

BoxMOT: pluggable SOTA tracking modules for segmentation, object detection and pose estimation models

Python 7,332 1,789 Updated May 22, 2025

Thick lens intraocular lens calculation formula toolbox written in Python, developed by Dr Gatinel's team, Anterior Segment and Refractive Surgery Department, Rothschild Foundation Hospital, Paris.

Jupyter Notebook 8 1 Updated May 15, 2024

⚡ TabPFN: Foundation Model for Tabular Data ⚡

Python 3,665 319 Updated May 22, 2025

Python markdown terminal. Built for mkdocs

Python 121 10 Updated Jan 14, 2025

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

R 182 87 Updated Mar 20, 2024

A game about ducks, brewing potions and explosions 🦆💥

GDScript 3 Updated Jan 30, 2025

Fully open reproduction of DeepSeek-R1

Python 24,522 2,258 Updated May 23, 2025

LeechBlock NG (Next Generation) for Firefox is a simple productivity tool designed to block those time-wasting sites that can suck the life out of your working day. All you need to do is specify wh…

JavaScript 834 75 Updated Apr 6, 2025

Seamlessly track SQLAlchemy performance in FastAPI with plug-and-play monitoring middleware 🔍

Python 9 Updated May 16, 2025

The standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.

Python 10,547 826 Updated Apr 10, 2025

Python library for extracting chords from multiple sound file formats

Python 175 28 Updated Feb 9, 2025

sfz instruments website

SCSS 35 27 Updated Mar 20, 2025

SFZ Sampler

C++ 99 12 Updated May 21, 2025

Open re-implementation of Medal of Honor: Allied Assault including Spearhead and Breakthrough expansions with modern features and bugfixes from ioquake3 with cross-platform support

C 549 37 Updated May 21, 2025

Neural Networks: Zero to Hero

Jupyter Notebook 13,810 1,918 Updated Aug 18, 2024
Jupyter Notebook 5 1 Updated Sep 17, 2024

Go implementation of AppImage tools

Go 963 75 Updated Apr 28, 2025

Build Scripts For Zyn-Fusion

Makefile 129 40 Updated Aug 8, 2024
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