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Python 4 3 Updated Mar 8, 2024

Codes used throughout the works presented in my PhD thesis

Jupyter Notebook 2 Updated Jul 30, 2021

R tools for analysis and visualization of single-cell subclustering data

HTML 16 2 Updated Apr 29, 2024

Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease

R 58 15 Updated Dec 13, 2024
Python 16 1 Updated Jun 6, 2022

scWGCNA

HTML 60 10 Updated Nov 8, 2022

RStudio addin to style Python code blocks with black

R 10 Updated Jun 17, 2024
HTML 94 62 Updated Aug 20, 2019

Matlab source codes for Pitman-Yor Diffusion Trees models

TeX 1 Updated Mar 23, 2020

Trajectory Alignment of Gene Expression Dynamics

R 7 2 Updated Nov 6, 2024

Spatial Single Cell Analysis in Python

Python 492 96 Updated Jun 16, 2025

🟩⬜ Generates a snake game from a github user contributions graph and output a screen capture as animated svg or gif

TypeScript 4,990 1,669 Updated Apr 24, 2025

A collection of themes for RStudio

R 313 19 Updated Jul 4, 2024

Wrapper to quickly load the sj-packages.

R 27 4 Updated May 20, 2025

My contributions to the #TidyTuesday challenge, a weekly data visualization challenge. All plots are 💯 created in R with ggplot2.

R 808 142 Updated Sep 26, 2023

Community-provided extensions to Seurat

R 334 136 Updated Nov 22, 2024

repository for analyses of the TARGET-NBL dataset

R 3 1 Updated Jun 25, 2018

R package for Protein activity analysis of single-cell RNAseq.

R 82 24 Updated Dec 15, 2022

R package implementation of Milo for testing for differential abundance in KNN graphs

R 381 23 Updated Jun 4, 2025

A unified downloader+preprocessor for cancer genomics datasets

Python 16 7 Updated Apr 7, 2024

范叶亮的个人网站 | Leo Van's Website

Python 83 16 Updated May 26, 2025

Unlock: Paraphrase unlimited words, 7 Writing mode , 4 Synonyms options, 6000 Summarizer word limit, 15 Sentences processed at once, Unlimited Freeze Words and phrases (101k active users' choices)

JavaScript 957 149 Updated Sep 27, 2024

An R package for Annotation and Quality Control Report of Single-Cell RNA-Sequencing Data.

R 6 Updated Jul 6, 2023

二代测序数据分析

369 168 Updated Dec 6, 2023

Simplify functional enrichment results

R 116 16 Updated Sep 13, 2024

Interface to ChatGPT from R

R 328 36 Updated Jan 31, 2025

Wrapper scripts for viper's network regulator analysis and reporting.

R 1 1 Updated May 22, 2018

Network Reverse Engineering through AP inference of Mutual Information

Java 86 25 Updated Mar 6, 2023

aracne.networks, a data package containing gene regulatory networks assembled from TCGA data by the ARACNe algorithm

R 7 2 Updated Jun 20, 2016

corto (Correlation Tool): an R package to generate correlation-based DPI networks

R 20 8 Updated Mar 28, 2023
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