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Development versions of the g-xTB method. Final implementation will not happen here but in tblite (https://github.com/tblite/tblite).

37 1 Updated Jun 24, 2025

Hybrid ML/MM free energy simulations.

Python 4 Updated Jun 20, 2025

A package for training and patching EMLE models, with routines for fitting LJ parameters.

Python 3 Updated Jun 19, 2025

PhaseForge is a framework for high-throughput alloy phase diagram prediction using machine learning interatomic potentials (MLIPs) integrated with ATAT and CALPHAD modeling. Includes tools for stru…

Shell 26 Updated Jun 24, 2025

NSGA2, NSGA3, R-NSGA3, MOEAD, Genetic Algorithms (GA), Differential Evolution (DE), CMAES, PSO

Python 2,563 428 Updated Jun 25, 2025

Gaussian Mixture Regression

Python 191 49 Updated Dec 16, 2024

Kohn-Sham Python-based inversion Evaluation Software

Python 13 5 Updated Dec 22, 2021

https://gitee.com/ajz34/vdw.git

Python 7 1 Updated Mar 21, 2023

Geometrical Counter-Poise Correction

Fortran 11 7 Updated Nov 19, 2024

Repository for data and figure generation used in "Distillation of atomistic foundation models across architectures and chemical domains"

Jupyter Notebook 5 1 Updated Jun 12, 2025

dataset augmentation for atomistic machine learning

Python 17 Updated Jun 12, 2025

Advanced ASE Transition State Tools for ABACUS and Deep-Potential

Python 32 12 Updated Mar 10, 2025

Experimental and calculated small molecule hydration free energies

Python 119 54 Updated Oct 14, 2022

libAtoms/QUIP molecular dynamics framework: https://libatoms.github.io

Fortran 363 124 Updated May 13, 2025

kinetic isotope effect prediction with Gaussian

Python 16 6 Updated Mar 25, 2023

Fréchet ChemNet Distance on PyTorch

Python 50 13 Updated Mar 22, 2019

torch-molecule is a deep learning package for molecular discovery, designed with an sklearn-style interface for property prediction, inverse design and representation learning.

Python 227 28 Updated Jun 15, 2025

Materials related to the 2024-2025 mini course on Probabilistic Models and Bayesian Methods at the Faculty of Finance at Kharazmi University

Jupyter Notebook 21 3 Updated Jun 12, 2025

A molecular simulation package integrating MLFFs in MOFs for DAC

Python 32 6 Updated Apr 15, 2025

ase for ab-initio calculation

6 Updated Nov 28, 2009

DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design

Python 335 47 Updated Apr 17, 2024

Retrosynthesis prediction for organic molecules with LocalRetro

Python 96 29 Updated May 30, 2024

Software associated with Automated Invention of MCRs paper

Jupyter Notebook 6 1 Updated Nov 27, 2024

Transfrormation between Cartesian coordinates and redundant internal coordinates

C++ 23 8 Updated Jun 2, 2022

Visualization of the reaction networks from Chemoton, including networks, energies, molecular models and profiles, based in Bokeh

HTML 2 Updated Apr 22, 2025

A Python implementation of the direct MaxFlux method for transition state search

Python 31 2 Updated Aug 21, 2024

Supporting Information for the bond capacitor-inspired EEQ model (EEQ_{BC}) publication.

Python 2 Updated Apr 8, 2025

Electronegativity equilibration model for atomic partial charges

Fortran 2 1 Updated May 6, 2025
C++ 34 15 Updated Jun 14, 2025

Universal cheminformatics toolkit, utilities and database search tools

C++ 352 113 Updated Jun 25, 2025
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