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Bioinformatic Application for Quantification and LAbeling of VirAl taxonomy

Python 5 Updated Jun 9, 2025

Personalized identification of Autism-related bacteria in the gut microbiome using eXplainable Artificial Intelligence

Jupyter Notebook 1 Updated Jan 28, 2025

Large language model Mistral for DNA

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A grammar of graphics for comparative genomics

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Tutorial on large language models for genomics

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control your music from the command line

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Friends don't let friends make certain types of data visualization - What are they and why are they bad.

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A cross-platform, efficient and practical CSV/TSV toolkit in Golang

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A streamlined workflow and GUI for real-time species identification and pathogen characterization via nanopore sequencing data. Engineered for precision, speed, and user-friendliness, with offline …

Python 16 3 Updated Oct 4, 2024

A list of deep learning implementations in biology

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Sample workflow with Nextflow

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Single-cell Transcriptome and Regulome Analysis Pipeline

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Open source documentation of Microsoft Azure

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Code Safety Inspection Service

20 14 Updated Sep 23, 2022

Convert scikit-learn models to PyTorch modules

Python 163 9 Updated May 15, 2024

EASI-FISH analysis pipeline for spatial transcriptomics

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GCP for Bioinformatics Researchers

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Protein Graph Library

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Cross-platform software to draw phylogenetic trees

C# 218 9 Updated Apr 10, 2025

Python library to decorate and beautify strings

Python 263 12 Updated Feb 23, 2022

A big data version of dada2 pipeline for processing high throughput amplicon data for fierer lab

HTML 6 8 Updated Mar 3, 2022
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