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Code for ''Model Criticism in Latent Space'' by Seth, Murray and Williams PDF

Dependencies

GPML - http://www.gaussianprocess.org/gpml/code/matlab/doc/
GPstuff - http://research.cs.aalto.fi/pml/software/gpstuff/
JAGS - http://mcmc-jags.sourceforge.net/
matjags - http://psiexp.ss.uci.edu/research/programs_data/jags/
cbrewer - https://www.mathworks.com/matlabcentral/fileexchange/34087-cbrewer---colorbrewer-schemes-for-matlab

Datasets

BSDS300 - https://www2.eecs.berkeley.edu/Research/Projects/CS/vision/bsds/
Honey Bee - https://www.cc.gatech.edu/~borg/ijcv_psslds/
CO2 - ftp://ftp.cmdl.noaa.gov/ccg/co2/trends/co2_mm_mlo.txt

Datasets should be added to data/ e.g., data/BSDA300/.

Running experiments

Section 4.1 - scripts/runImagePatch.m
Section 4.2 - scripts/runBee.m
Section 4.3 - scripts/runCO2.m

Results

Results are stored in data/ as *.mat files.
Results of the run can be asked from the author.

Reproducing figures

Run plots/plotList.m to generate plots presented in the figure.

Figure 2 - plots/plotImagePatch.m
Figure 3 - plots/plotImagePatch2.m
Figure 4 - plots/plotBee.m
Figure 5 - plots/plotBee2.m
Figure 6 - plots/plotCO2.m
Figure 7 - plots/plotList.m

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Code for ''Model Criticism in Latent Space'' by Seth, Murray and Williams

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