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Infra for a prefect system prototype -- not for use in production
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action-pipenv-aws-setup Public
Forked from Sage-Bionetworks/action-pipenv-aws-setupCommon github action setup steps
Apache License 2.0 UpdatedMar 7, 2023 -
organizations-infra Public
Forked from Sage-Bionetworks-IT/organizations-infraSage AWS Organizations
Jinja Apache License 2.0 UpdatedAug 12, 2022 -
BridgeDownstream Public
Forked from Sage-Bionetworks/BridgeDownstreamGlue pipeline to export Bridge data as Parquet and CSV to Synapse
Python UpdatedMar 2, 2022 -
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cfn-s3objects-macro Public
Forked from Sage-Bionetworks-IT/cfn-s3objects-macroThe S3Objects macro adds a new resource type: AWS::S3::Object which you can use to populate an S3 bucket.
Python Apache License 2.0 UpdatedNov 5, 2021 -
kubernetes-deployments Public
Forked from Sage-Bionetworks/kubernetes-deploymentsKubernetes deployments on ibc EKS cluster
UpdatedSep 23, 2021 -
aws-infra Public
Forked from Sage-Bionetworks/aws-infraGlobal Sage Bionetworks AWS Infrastructure
Jinja Apache License 2.0 UpdatedSep 21, 2021 -
nextflow Public
Forked from nextflow-io/nextflowA DSL for data-driven computational pipelines
Groovy Apache License 2.0 UpdatedMay 4, 2021 -
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synapse-nextflow Public
Forked from Sage-Bionetworks-Workflows/nf-tool-synapseclientsynapseclient cli wrapped in nextflow
Nextflow UpdatedMar 9, 2021 -
aws-genomics-workflows Public
Forked from aws-samples/aws-genomics-workflowsGenomics Workflows on AWS
Shell MIT No Attribution UpdatedFeb 19, 2021 -
spark-json-schema Public
Forked from zalando-incubator/spark-json-schemaJSON schema parser for Apache Spark
Scala MIT License UpdatedFeb 10, 2021 -
nextflow-scratch Public
a repository to test nextflow scripts
Nextflow MIT License UpdatedFeb 4, 2021 -
service-catalog-library Public
Forked from Sage-Bionetworks/service-catalog-libraryLibrary of service catalog templates
Shell Apache License 2.0 UpdatedOct 15, 2020 -
scipool-infra Public
Forked from thomasyu888/scipoolprod-infraProject to manage org-sagebase-scipoolprod account on AWS
Apache License 2.0 UpdatedOct 8, 2020 -
ci-examples Public
Forked from Sage-Bionetworks-IT/ci-examplesDockerfile Apache License 2.0 UpdatedSep 21, 2020 -
dockstore-workflow-rnaseq Public
Forked from Sage-Bionetworks-Workflows/dockstore-workflow-rnaseqCommon Workflow Language MIT License UpdatedSep 11, 2020 -
toil Public
Forked from DataBiosphere/toilA scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Python Apache License 2.0 UpdatedSep 9, 2020 -
packer-rstudio Public
Forked from Sage-Bionetworks-IT/packer-rstudioA repository to build an rstudio AMI
Shell Apache License 2.0 UpdatedJun 16, 2020 -
packer-base-ubuntu-bionic Public
Forked from Sage-Bionetworks-IT/packer-base-ubuntu-bionicA packer project to build a ubuntu bionic AMI image
Shell Apache Lice 8FD8 nse 2.0 UpdatedJun 16, 2020 -
scipooldev-infra Public
Forked from zaro0508/scipooldev-infraInfrastructure for org-sagebase-scipooldev AWS account
Apache License 2.0 UpdatedApr 27, 2020 -
infra-utils Public
Forked from Sage-Bionetworks/infra-utilsUtilities for Sage infrastructure projects
PowerShell Apache License 2.0 UpdatedApr 10, 2020 -
admincentral-infra Public
Forked from zaro0508/admincentral-infraInfrastructure for the AWS AdminCentral account
Apache License 2.0 UpdatedMar 17, 2020 -
imagecentral-infra Public
Forked from zaro0508/imagecentral-infraManage the central AMI repository account
Apache License 2.0 UpdatedMar 6, 2020 -
sandbox-infra Public
Forked from zaro0508/sandbox-infraAutomation for the Sage AWS org-sagebase-sandbox account
Apache License 2.0 UpdatedJan 6, 2020 -
itsandbox-infra Public
Forked from zaro0508/itsandbox-infraAn AWS account for Sagebio IT testing.
Apache License 2.0 UpdatedNov 26, 2019 -
cwltest Public
Forked from common-workflow-language/cwltestFramework for testing CWL tools and workflows
Python Apache License 2.0 UpdatedOct 16, 2019