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@theislab

Theis Lab

Institute of Computational Biology

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  1. single-cell-tutorial single-cell-tutorial Public

    Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

    Jupyter Notebook 1.5k 476

  2. single-cell-best-practices single-cell-best-practices Public

    https://www.sc-best-practices.org

    Jupyter Notebook 923 218

  3. scvelo scvelo Public

    RNA Velocity generalized through dynamical modeling

    Python 447 106

  4. cellrank cellrank Public

    CellRank: dynamics from multi-view single-cell data

    Python 388 50

  5. scarches scarches Public

    Reference mapping for single-cell genomics

    Jupyter Notebook 369 60

  6. scib scib Public

    Benchmarking analysis of data integration tools

    Python 361 69

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