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- 8 commits
- 16 files changed
- 4 contributors
Commits on Oct 13, 2022
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Make rpy2 and anndata2ri optional (#339)
* make rpy2 and anndata2ri optional * skip tests for macos * add description for optional dependencies * remove R import for LISI, independent of R * ensure n_epoch is int * wrap remaining rpy2 import statements
Commits on Oct 16, 2022
Commits on Oct 24, 2022
Commits on Oct 28, 2022
Commits on Nov 22, 2022
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* add harmony * fix formatting * update exception * add test for harmony * install harmony Co-authored-by: Michaela Mueller <michaela.mueller@helmholtz-muenchen.de> Co-authored-by: Michaela Mueller <51025211+mumichae@users.noreply.github.com>
3 people authoredNov 22, 2022 -
* use r-lib actions * move r-lib to top * add R dependency install * return error instead of np.nan when kBET is not installed * install devtools via R * use rp2y * use remotes instead of devtools * move r-lib actions to test workflow * add GITHUB_PAT * separate run for R functions * use correct R version * install test dependencies
Commits on Nov 25, 2022
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A new version of louvain has been released after quite some time. This PR updates scIB to use the new version, unpinning igraph. Co-authored-by: Michaela Mueller <51025211+mumichae@users.noreply.github.com>
Commits on Dec 2, 2022
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