Amplicon sequencing analysis workflow using DADA2 and QIIME2
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
Compare different differential abundance and expression methods
Collection of commonly used RDP Tools for easy building
Various functions for analysis of microbial community data
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
The is mostly a wrapper tool using phyloseq and microbiome R packages.
Seplos Controller mit Webseite Der Esp8266 ist über ein Rs485 Modul mit dem Seplos BMS verbunden und kann diesem seine Daten entlocken. Shutdown Button: Das BMS wird ausgeschaltet , selbe Art als ob man länger auf dem BMS tastschalter bleibt. Kurzum die Firmware die es hier zum Download gibt, liest das Bms aus und es lässt sich per Button Klick …
Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
A Collection of Bioinformatics Projects
Tools for phylogenetic data analysis including visualization and cluster-computing support.
💯 Snakemake-based amplicon processing protocol for 16S and ITS sequences.
Dadaist2 🟨 Highway to R
accessory functions for processing microbial community data
Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project
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