nci

Here are 27 public repositories matching this topic...

CBICA / CaPTk

Star 188

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Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

machine-learning analytics cpp cancer cpp11 medical-imaging cancer-imaging-research image-analysis medical-image-computing cwl itcr radiomics medical-image-processing nih nci nci-itcr radiomics-features cwltool u24 cbica

Updated Dec 9, 2023

C++

Bioconductor / GenomicDataCommons

Star 89

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Provide R access to the NCI Genomic Data Commons portal.

data-science bioinformatics r genomics cancer tcga api-client core-services bioconductor vignette nci

Updated Apr 16, 2025

R

jmsolano / denstoolkit

Sponsor
Star 13

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DensToolKit is a suite of programs for analyzing the molecular electron density (ρ) and several fields derived from it. DTK also includes programs to analyze the topology of ρ. More information can be found in https://sites.google.com/site/jmsolanoalt/home/software/denstoolkit.

quantum-chemistry nci qtaim electrondensity

Updated Apr 18, 2025

C++

cinit / NCIHost

Star 11

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Low-level NFC manipulator for Android

android mifare nfc nxp nci mifare-classic nxp-nfc sn100 nq330 nq-nci sn200

Updated Jan 13, 2022

C++

CBIIT / icdc-model-tool

Star 9

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ICDC data model representations and build tools

graph cancer-genomics graph-database nci data-commons canine icdc integrated-canine-data-commons crdc

Updated Apr 17, 2025

Perl

akarazeev / BioHack2017

Star 4

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🔬 Biohack 3-5 of March, 2017

nlp natural-language-processing text-mining data-mining bioinformatics pubmed mesh biohacking medical-subject-headings umls nci biohack

Updated Apr 20, 2017

Jupyter Notebook

sbamin / gdc-client

Star 4

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docker container for running NCI GDC gdc-client

docker computational-biology gdc docker-images bioinformatics-containers nci

Updated Apr 22, 2018

Shell

seandavi / ClinicalTrialsAPI

Star 4

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Access the NIH ClinicalTrials.gov REST API

data-mining bioinformatics r api-client rstats clinical-trials informatics nih nci

Updated Mar 21, 2017

R

CBIIT / UMLS-MetaMap-API-Scripts

Star 4

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This repository is dedicated to development of Python scripts which use API to UMLS MetaMap to map semantics of common data elemnts to UMLS and NCI concepts

python umls nci ncit umls-metathesaurus covid-19 umls-cui metamap-api

Updated Apr 18, 2023

Python

ohsu-comp-bio / gdc-scan

Star 3

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A library for navigating and downloading from the GDC API

etl nci

Updated Apr 11, 2017

Python

WayneHartigan / 123-Navigation

Star 3

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A Google Chrome extension that allows users to navigate throughout Chrome using only their voice and on screen indicators. Developed for a Final Year Project in BSc (Honours) in Computing at The National College of Ireland (NCI).

chrome-extension chrome navigation webkit nci

Updated Jun 16, 2020

JavaScript

seandavi / state-cancer-profile-scraper

Star 3

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Bulk access and download state cancer profiles data

csv cancer clickhouse csv-files states united-states epidemiology mortality seer incidence nci u24ca289073

Updated May 1, 2025

Python

mer-hybris / libncicore

Star 3

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Implementation of NFC NCI state machine

nfc nci

Updated May 5, 2025

C

CBIIT / icdc-model-tool-docker

Star 2

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Wrapper for Dockerized ICDC model-tool app

docker graph-database nci data-commons canine integrated-canine-data-commons fnlcr

Updated Aug 23, 2019

Perl

NCBI-Hackathons / Peptides-SpecTra-Annotations-PaSTA

Star 2

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an analysis workflow to generate annotated peptide sequence from proteomic spectra using containerized tools.

datascience mass-spectrometry fair containerization nci

Updated Sep 19, 2018

empowerai / agile-bpa

Star 2

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NCI - Agile BPA - FDA Food Recall Impact

agile mvp 18f agile-bpa gsa nci devsecops

Updated Apr 5, 2016

JavaScript

siyka-au / mobject-ext

Star 2

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mobject.io extensions

fsm oop motion finite-state-machine cnc twincat beckhoff twincat3 structured-text nc nci iec61131-3 beckhoff-twincat nc-i plc-interpolation kinetic-transformation

Updated Jan 22, 2023

mer-hybris / nfcd-binder-plugin

Star 1

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Binder based adaptation for https://git.sailfishos.org/mer-core/nfcd/

android binder nfc nci

Updated Jun 5, 2023

C

skchronicles / DNAnexus

Star 1

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DNAnexus Workflow for RNA-seq data

rna-seq ngs nci dnanexus-workflows

Updated Nov 18, 2019

Shell

empowerai / myHealth360

Star 1

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myHealth360

data oauth2 hackathon swagger oai health nci myhealth360

Updated Apr 25, 2017

JavaScript

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nci

Here are 27 public repositories matching this topic...

CBICA / CaPTk

Bioconductor / GenomicDataCommons

jmsolano / denstoolkit

cinit / NCIHost

CBIIT / icdc-model-tool

akarazeev / BioHack2017

sbamin / gdc-client

seandavi / ClinicalTrialsAPI

CBIIT / UMLS-MetaMap-API-Scripts

ohsu-comp-bio / gdc-scan

WayneHartigan / 123-Navigation

seandavi / state-cancer-profile-scraper

mer-hybris / libncicore

CBIIT / icdc-model-tool-docker

NCBI-Hackathons / Peptides-SpecTra-Annotations-PaSTA

empowerai / agile-bpa

siyka-au / mobject-ext

mer-hybris / nfcd-binder-plugin

skchronicles / DNAnexus

empowerai / myHealth360

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