User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
Interactive software tool for the assignment of cell types in single-cell studies.
simplified cellranger for long-read data
Single-cell identity definition using random forest modelling and recursive feature elimination
Deep Unsupervised Single-cell Clustering (DUSC) is a hybrid approach for cell type discovery in scRNA-seq data.
Single-Cell RNA-seq analysis workflow for 10x Genomics data
Recreation and enrichment of the gastric (GC) cancer single-cell RNA-seq (scRNA-seq) data analysis pipeline described in the "Comprehensive analysis of metastatic gastric cancer tumour cells using single‑cell RNA‑seq" by Wang B. et. al, using the raw counts matrix they provide.
Original scripts for the manuscript "Sex shapes cell-type-specific transcriptional signatures of stress exposure in the mouse hypothalamus", Brivio et al. Cell Reports, 2023
Optimización del protocolo de Xiao et al. para el análisis de scRNA-seq en R.
Implementing GANs in the sc-RNA-Seq pipeline
This repository is for ER+ breast cancer scRNA-seq data processing and figure generation.
My final project of the Master's in Bioinformatics and Computational Biology.
sc-RNA-seq data analysis of cardiac development in zebrafish
In this reposity I will give you all script I created. All this script are specialised for one way : annalyse RNA-seq data.
Add a description, image, and links to the sc-rna-seq topic page so that developers can more easily learn about it.
To associate your repository with the sc-rna-seq topic, visit your repo's landing page and select "manage topics."