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HuMMuS Public
Forked from cantinilab/HuMMuSMolecular interactions inference from single-cell multi-omics data
R GNU Affero General Public License v3.0 UpdatedJun 4, 2025 -
pySankey Public
Forked from anazalea/pySankeycreate sankey diagrams with matplotlib
Jupyter Notebook GNU General Public License v3.0 UpdatedSep 9, 2024 -
Mowgli Public
Forked from cantinilab/MowgliSingle-cell multi-omics integration using Optimal Transport
Python GNU General Public License v3.0 UpdatedSep 6, 2024 -
STREAM Public
Forked from pinellolab/STREAMSTREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Jupyter Notebook GNU Affero General Public License v3.0 UpdatedAug 29, 2024 -
momix-notebook Public
Forked from cantinilab/momix-notebookJupyter Notebook GNU General Public License v3.0 UpdatedNov 14, 2023 -
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scNET Public
Forked from cantinilab/scNETjupyther notebook comparing reproducibility of single-cell network inference algorithms
Jupyter Notebook UpdatedJul 4, 2021 -
cellxgene_VIP Public
Forked from interactivereport/cellxgene_VIPEnables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also…
HTML MIT License UpdatedOct 8, 2020 -
MultiplexDBNet Public
a Python/based tool for the construction of MultiLayered Networks from publicly available data
Python MIT License UpdatedSep 25, 2020 -
scanpy_usage Public
Forked from scverse/scanpy_usageScanpy use cases.
HTML BSD 3-Clause "New" or "Revised" License UpdatedSep 4, 2020 -
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unravel Public
Forked from gvdr/unravelPlots Meaningful Representations of Complex Networks
R Other UpdatedJan 17, 2020 -
IntroToGit Public
Slides and introductiory material for getting started with Git!
UpdatedOct 14, 2019 -
awesome-reproducible-research Public
Forked from leipzig/awesome-reproducible-researchA curated list of reproducible research case studies, projects, tutorials, and media
UpdatedOct 6, 2019 -
Awesome-Bioinformatics Public
Forked from danielecook/Awesome-BioinformaticsA curated list of awesome Bioinformatics libraries and software.
UpdatedAug 20, 2019 -
pyntacle Public
Forked from mazzalab/pyntacleA high performance python package for network analysis based on non canonical metrics
Python UpdatedAug 16, 2019 -
incas Public
Forked from mtruglio/canvasAn integrative annotator of human Copy Number Variants using functional genomic features
HTML UpdatedOct 29, 2018 -
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