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Get the consensus sequences from SAM (and BAM) files, ignoring the reference

Python 11 4 Updated Oct 27, 2019

Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

Python 25 6 Updated May 18, 2025

calling SVs from Blasr contig level alignments

C++ 54 23 Updated Mar 9, 2018
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