Genome-wide assessment of differential translations with ribosome profiling data
1.2.0
Zhengtao Xiao
The xtail package is designed to identify genes exhibiting differential translation between two experimental conditions by simultaneously analyzing changes in RNA-seq and ribo-seq data. The estimation of changes in read counts are performed using the DESeq2 package.
- R >= 3.2
- DESeq2
- Rcpp >= 0.10.1
- parallel
Details of the installation process can be found in the INSTALL file located in the root directory of the package. Additionally, a Docker image of xtail is available; please refer to this page for more information.
The R install packages are located in the "releases" tag.
To use Xtail, please refer to the instructions in xtail.pdf in this subdirectory inst/doc, or type: vignette("xtail") at the R-prompt.
Xtail is licensed under the GPL version 3 or any later version
For more information please contact zhengtao.xiao[at]xjtu.edu.cn