8000 chore: Try to fix Upgrade dependencies workflow by Czaki · Pull Request #1264 · 4DNucleome/PartSeg · GitHub
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chore: Try to fix Upgrade dependencies workflow #1264

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Merged
merged 1 commit into from
May 4, 2025
Merged

chore: Try to fix Upgrade dependencies workflow #1264

merged 1 commit into from
May 4, 2025

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Czaki
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@Czaki Czaki commented May 4, 2025 •
edited by coderabbitai bot
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The documentation suggests that ssh key is no longe needed.

Summary by Sourcery

Remove SSH key configuration from the dependency upgrade workflow

CI:

  • Updated upgrade-dependencies.yml workflow to remove SSH key settings

Chores:

  • Commented out SSH key configuration in the GitHub Actions workflow

Summary by CodeRabbit

  • Chores
    • Updated workflow configuration by disabling the use of a deployment SSH key in the dependency upgrade process. No changes to workflow functionality.

@Czaki
chore: Try to fix Upgrade dependencies workflow
5c2c566 
The documentation sugest that ssh key is no longe needed.
@Czaki Czaki added this to the 0.16.2 milestone May 4, 2025
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sourcery-ai bot commented May 4, 2025 •
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Reviewer's Guide

This pull request attempts to fix the 'Upgrade dependencies' workflow by commenting out the ssh-key parameter previously passed to the actions/checkout step, based on documentation suggesting it is no longer necessary.

File-Level Changes

Change Details Files
Removed SSH key configuration from checkout action
  • Commented out the with block containing the ssh-key parameter for the actions/checkout@v4 step.
 .github/workflows/upgrade-dependencies.yml
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coderabbitai bot commented May 4, 2025 •
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Walkthrough

The update modifies the GitHub Actions workflow configuration file .github/workflows/upgrade-dependencies.yml by commenting out the with block for the actions/checkout@v4 step. This block previously included the ssh-key parameter that referenced a secret named DEPLOY_KEY. No other changes are made to the workflow or its logic.

Changes

File(s) Change Summary
.github/workflows/upgrade-dependencies.yml Commented out the with block containing the ssh-key parameter for the actions/checkout@v4 step. No other modifications.

Poem

A whisk of a paw, a hop in the flow,
The secret key’s hidden, now resting below.
No more with-block in checkout’s domain,
The workflow continues, simple and plain.
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sourcery-ai[bot]
sourcery-ai bot reviewed May 4, 2025
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Hey @Czaki - I've reviewed your changes - here's some feedback:

  • Consider removing the commented-out code block instead of leaving it in the file.
Here's what I looked at during the review
  • 🟢 General issues: all looks good
  • 🟢 Security: all looks good
  • 🟢 Testing: all looks good
  • 🟢 Documentation: all looks good
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Help me be more useful! Please click 👍 or 👎 on each comment and I'll use the feedback to improve your reviews.

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sonarqubecloud bot commented May 4, 2025

Quality Gate Passed Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

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Actionable comments posted: 0

🧹 Nitpick comments (1)
.github/workflows/upgrade-dependencies.yml (1)

19-22: Remove outdated SSH key configuration and clean up commented block

The ssh-key parameter is no longer required with actions/checkout@v4 when using a PAT or the default GITHUB_TOKEN. Removing this block simplifies the workflow:

  • Verify that the default GITHUB_TOKEN or the provided GHA_TOKEN has the necessary permissions to clone and push to auto-dependency-upgrades.
  • Test the scheduled run to ensure the PR is still created successfully.
  • Delete lines 19–22 instead of leaving them commented to keep the YAML file clean and maintainable.
📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 4ec6db6 and 5c2c566.

📒 Files selected for processing (1)
  • .github/workflows/upgrade-dependencies.yml (1 hunks)
⏰ Context from checks skipped due to timeout of 300000ms (28)
  • GitHub Check: 4DNucleome.PartSeg (Tests_other test windows)
  • GitHub Check: 4DNucleome.PartSeg (Tests_linux test_linux)
  • GitHub Check: 4DNucleome.PartSeg (Tests_other test macos)
  • GitHub Check: 4DNucleome.PartSeg (Builds pyinstaller windows)
  • GitHub Check: 4DNucleome.PartSeg (Builds pyinstaller macos_arm)
  • GitHub Check: 4DNucleome.PartSeg (Builds sdist)
  • GitHub Check: 4DNucleome.PartSeg (Builds pyinstaller macos)
  • GitHub Check: 4DNucleome.PartSeg (Builds pyinstaller_linux)
  • GitHub Check: Base py3.10 / ubuntu-24.04 py 3.10 latest PyQt5
  • GitHub Check: Base py3.11 / macos-13 py 3.11 latest PyQt5
  • GitHub Check: Base py3.9 / ubuntu-24.04 py 3.9 latest PyQt5
  • GitHub Check: Base py3.10 / ubuntu-22.04 py 3.10 latest PyQt5 _pydantic_1
  • GitHub Check: Base py3.12 / ubuntu-24.04 py 3.12 latest PyQt5
  • GitHub Check: Base py3.12 / ubuntu-22.04 py 3.12 latest PyQt6
  • GitHub Check: Base py3.10 / ubuntu-24.04 py 3.10 latest PySide6
  • GitHub Check: Base py3.10 / ubuntu-22.04 py 3.10 latest PySide2
  • GitHub Check: Base py3.11 / windows-latest py 3.11 latest PyQt5
  • GitHub Check: Base py3.12 / macos-14 py 3.12 latest PyQt6
  • GitHub Check: Base py3.11 / ubuntu-24.04 py 3.11 latest PyQt5
  • GitHub Check: Test PartSeg minimal / ubuntu-24.04 py 3.9 latest PyQt5
  • GitHub Check: test_coverage / ubuntu-24.04 py 3.12 latest PyQt5
  • GitHub Check: Test PartSeg conda
  • GitHub Check: 4DNucleome.PartSeg (Documentation_check help)
  • GitHub Check: 4DNucleome.PartSeg (Documentation_check Notebook_check)
  • GitHub Check: 4DNucleome.PartSeg (manifest_check manifest_check)
  • GitHub Check: 4DNucleome.PartSeg (GetTestData linux)
  • GitHub Check: 4DNucleome.PartSeg (formatting_check check_formating)
  • GitHub Check: Codacy Static Code Analysis

@Czaki Czaki merged commit 96f8681 into develop May 4, 2025
59 checks passed
@Czaki Czaki deleted the fix_dep_workflow branch May 4, 2025 15:27
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