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progen Public
Forked from salesforce/progenOfficial release of the ProGen models
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 10, 2025 -
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AF_Cluster Public
Forked from HWaymentSteele/AF_ClusterPredict multiple protein conformations using sequence clustering and AlphaFold2.
Jupyter Notebook MIT License UpdatedApr 25, 2025 -
af2_conformations Public
Forked from delalamo/af2_conformationsA series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
Python MIT License UpdatedApr 25, 2025 -
dl_binder_design Public
Forked from nrbennet/dl_binder_design -
RFdiffusion Public
Forked from RosettaCommons/RFdiffusionCode for running RFdiffusion
Python Other UpdatedApr 24, 2025 -
Uni-Fold Public
Forked from dptech-corp/Uni-FoldAn open-source platform for developing protein models beyond AlphaFold.
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ProteinMPNN Public
Forked from dauparas/ProteinMPNNCode for the ProteinMPNN paper
Jupyter Notebook MIT License UpdatedApr 14, 2025 -
localcolabfold Public
Forked from YoshitakaMo/localcolabfoldColabFold on your local PC
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bioemu Public
Forked from microsoft/bioemuInference code for scalable emulation of protein equilibrium ensembles with generative deep learning
Python MIT License UpdatedApr 4, 2025 -
alphaflow Public
Forked from bjing2016/alphaflowAlphaFold Meets Flow Matching for Generating Protein Ensembles
Python MIT License UpdatedApr 4, 2025 -
esm Public
Forked from facebookresearch/esmEvolutionary Scale Modeling (esm): Pretrained language models for proteins
Python MIT License UpdatedMar 31, 2025 -
foldseek Public
Forked from steineggerlab/foldseekFoldseek enables fast and sensitive comparisons of large structure sets.
C GNU General Public License v3.0 UpdatedFeb 25, 2025 -
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Antibody-antigen-complex-structure-benchmark-dataset Public
Forked from Zhaonan99/Antibody-antigen-complex-structure-benchmark-datasetUpdatedJan 5, 2024 -
lammpscn2 Public
[WIP] Refactoring lammpscn website
Creative Commons Zero v1.0 Universal UpdatedNov 7, 2023 -
Uni-Core Public
Forked from dptech-corp/Uni-Corean efficient distributed PyTorch framework
Python MIT License UpdatedOct 26, 2023 -
rid-kit Public
Forked from deepmodeling/rid-kitReinforced dynamics
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protein_flow Public
This is the repo to generate data for training generative models for protein
Python UpdatedJul 5, 2023 -
dflow Public
Forked from deepmodeling/dflowDflow is a Python framework for constructing scientific computing workflows (e.g. concurrent learning workflows) employing Argo Workflows as the workflow engine.
Python GNU Lesser General Public License v3.0 UpdatedJul 4, 2023 -
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dpdispatcher Public
Forked from deepmodeling/dpdispatchergenerate HPC scheduler systems jobs input scripts and submit these scripts to HPC systems and poke until they finish
Python GNU Lesser General Public License v3.0 UpdatedNov 29, 2022 -
dpdata Public
Forked from deepmodeling/dpdataManipulating multiple atomic simulation data formats, including DeePMD-kit, VASP, LAMMPS, ABACUS, etc.
Python GNU Lesser General Public License v3.0 UpdatedOct 10, 2022 -
PKU_Venues_Auto_Book Public
Forked from Charliecwei/PKU_Venues_Auto_Book智慧场馆自动预约（解决了滑块验证码识别问题）
Python Apache License 2.0 UpdatedOct 9, 2022 -
deepmd-kit Public
Forked from deepmodeling/deepmd-kitA deep learning package for many-body potential energy representation and molecular dynamics
C++ GNU Lesser General Public License v3.0 UpdatedOct 6, 2022
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