8000 maybe switch to niffler for output gz/reading gz · Issue #10 · Sam-Sims/kractor · GitHub
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content

maybe switch to niffler for output gz/reading gz #10

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
Sam-Sims opened this issue Sep 20, 2023 · 0 comments
Closed

maybe switch to niffler for output gz/reading gz #10

Sam-Sims opened this issue Sep 20, 2023 · 0 comments
Labels
enhancement New feature or request

Comments

@Sam-Sims
Copy link
Owner

Might be more robust then current method of checking GZ magic number (although less cool)

@Sam-Sims Sam-Sims added the enhancement New feature or request label Sep 20, 2023
@Sam-Sims Sam-Sims mentioned this issue Sep 21, 2023
6 tasks
Sam-Sims added a commit that referenced this issue Sep 22, 2023
* Support for paired-end files #12 
* Under the hood changes to use Niffler/Noodles for fastq parsing and compression #10 
* Steamline arguments related to compression outputs #7 #9
* Output a fasta file `--output-fasta` #13 
* Improved logging
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant
0