Highlights
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tskit Public
Forked from tskit-dev/tskitThe tree sequence toolkit
Python MIT License UpdatedJun 26, 2025 -
analysis2_manuscript Public
Forked from popsim-consortium/analysis2_manuscriptmanuscript repo for the paper describing selection additions and analysis
TeX UpdatedJun 25, 2025 -
Demographic_Inference Public
Forked from ak1376/Demographic_InferenceJupyter Notebook UpdatedJun 11, 2025 -
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msprime Public
Forked from tskit-dev/msprimeA reimplementation of Hudson's classical ms simulator for modern data sets.
Python GNU General Public License v3.0 UpdatedMar 22, 2025 -
stdpopsim Public
Forked from popsim-consortium/stdpopsimA library of standard simulation models for msprime
Python GNU General Public License v3.0 UpdatedMar 6, 2025 -
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popgensbi_snakemake Public
Forked from kr-colab/popgensbi_snakemakeSnakemake workflow for popgensbi
Jupyter Notebook MIT License UpdatedFeb 6, 2025 -
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sweetPotatoPie Public
Gail Garlick's Sweet Potato Pie Recipe
Creative Commons Zero v1.0 Universal UpdatedNov 28, 2024 -
SLiM Public
Forked from MesserLab/SLiMSLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platf…
C++ GNU General Public License v3.0 UpdatedNov 14, 2024 -
analysis2 Public
Forked from popsim-consortium/analysis2Analysis for the second consortium paper.
Jupyter Notebook UpdatedNov 11, 2024 -
bagels Public
open source bagel recipe; let's raise the quality of bagels worldwide 🥯 🚀
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workshops Public
Forked from popsim-consortium/workshopsA collection of workshop material
Jupyter Notebook UpdatedJul 5, 2024 -
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biol610 Public
intro to programming for IE2 evolution students
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disperseNN2 Public
Forked from kr-colab/disperseNN2estimating dispersal distance from georeferenced polymorphisms
Python UpdatedJul 28, 2023 -
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HyPhy: Hypothesis testing using Phylogenies
HyPhy 9BFA Other UpdatedMay 1, 2023 -
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pyslim Public
Forked from tskit-dev/pyslimTools for dealing with tree sequences coming to and from SLiM.
Python MIT License UpdatedJan 6, 2023 -
machine-learning-book Public
Forked from rasbt/machine-learning-bookCode Repository for Machine Learning with PyTorch and Scikit-Learn
Jupyter Notebook MIT License UpdatedSep 28, 2022 -
locator Public
Forked from kr-colab/locatordeep learning prediction of geographic location from individual genome sequences
Python Other UpdatedAug 17, 2022 -
adding-species-manuscript Public
Forked from popsim-consortium/adding-species-manuscriptmanuscript materials for the adding species paper
HTML UpdatedAug 1, 2022 -
demes-c Public
Forked from grahamgower/demes-cC library for parsing Demes demographic models
C MIT License UpdatedJun 2, 2022 -
limix Public
Forked from limix/limixLinear mixed model for genomic analyses.
Python Other UpdatedMay 18, 2022 -
msprime-1.0-paper Public
Forked from tskit-dev/msprime-1.0-paperPublication describing msprime 1.0
TeX UpdatedDec 7, 2021