Highlights
- Pro
Stars
modular API for genetic geolocation using deep neural networks (i.e. version 2 of locator)
A simple Snakemake profile for Slurm without --cluster-config
standardizing spatial simulation slim scripts with a template
torch-optimizer -- collection of optimizers for Pytorch
neural network for estimating demographic maps from SNPs
chriscrsmith / mapNN
Forked from kr-colab/mapNNneural network for estimating demographic maps from SNPs
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
estimating dispersal distance from georeferenced polymorphisms
Domain adaptative deep learning for population genetics
🙃 A delightful community-driven (with 2,400+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python…
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
manuscript materials for the adding species paper
A list of resources and inititive to help the Ukraine
PyTorch3D is FAIR's library of reusable components for deep learning with 3D data
SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platf…
Analysis for the second consortium paper.
Examples of canvas questions written in Markdown
Create quizzes in QTI format for Canvas from Markdown-based plain text
Recombination Landscape Estimation using Recurrent Neural Networks
deep learning prediction of geographic location from individual genome sequences