Stars
code repository for manuscript - MSL2 ensures biallelic gene expression
All pdfs of Victor Eijkhout's Art of HPC books and courses
CLI platform to experiment with codegen. Precursor to: https://lovable.dev
GPT4All: Run Local LLMs on Any Device. Open-source and available for commercial use.
Visual self-service analytics platform for big omics data.
Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Curated collection of open-source bioinformatics tools
📚 Freely available programming books
check for passive words, weasel words, duplicate words, typographical errors and words strunk & white don't like
Simple analysis tool to manually annotate RepeatModeler sequences
GeneAtlas is simple gene enrichment in normal tissue expression profiles.
Grid and ggplot2 based visualization for biological data
FakeSequence is an artificial non-functional realistic DNA sequence generator.
A generic, flexible, modular and scalable RNAseq pipeline
Hagfish - assess an assembly through creative use of coverage plots