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amyg Public
amyg, a pipeline for de novo genomic annotation of non-model organisms
Python MIT License UpdatedApr 14, 2025 -
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variants2genes Public
Obtaining case-associated variants and correspondent genes (from control/case experiments) in BASH/R enviroment
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< 8000 a href="/cfarkas/CellOracle" itemprop="name codeRepository" > CellOracle Public
Forked from morris-lab/CellOracleThis is the alpha version of the CellOracle package
Python Other UpdatedMay 7, 2024 -
annotate_my_genomes Public
A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes
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SARS-CoV-2-freebayes Public
Analysis of SARS-CoV-2 genome variants collected with freebayes variant caller
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gawn Public
Forked from enormandeau/gawnGenome Annotation Without Nightmares
Perl UpdatedDec 20, 2021 -
nextflow Public
Forked from nextflow-io/nextflowA DSL for data-driven computational pipelines
Groovy Apache License 2.0 UpdatedDec 7, 2021 -
python-data-science-project Public
Dockerfile BSD 3-Clause "New" or "Revised" License UpdatedNov 4, 2021 -
Analisis of Skin Cancer MNIST: HAM10000 dataset using state-of-the-art deep learning methods
Jupyter Notebook MIT License UpdatedOct 4, 2021 -
Analysis of SALL2 isoform specific ChIP-seq data
UpdatedFeb 22, 2021 -
SARS-CoV-2_illumina_analysis Public
Computational analysis to discover germline variants in illumina NGS data from SARS-CoV-2
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FEELnc Public
Forked from tderrien/FEELncFEELnc : FlExible Extraction of LncRNA
Perl GNU General Public License v3.0 UpdatedNov 12, 2020 -
ProblematicSites_SARS-CoV2 Public
Forked from W-L/ProblematicSites_SARS-CoV2Python UpdatedAug 27, 2020 -
gff3sort Public
Forked from tao-bioinfo/gff3sortGFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
Perl GNU General Public License v3.0 UpdatedJun 27, 2020 -
shc Public
Forked from neurobin/shcShell script compiler
C GNU General Public License v3.0 UpdatedMay 27, 2020 -
Genotype-variants Public
A pipeline for collecting and visualize NGS variants from genetically engineered mouse models
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vcftools Public
Forked from jydu/vcftoolsA set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.
C++ GNU Lesser General Public License v3.0 UpdatedSep 11, 2018
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