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genomics_general Public
Forked from simonhmartin/genomics_generalGeneral tools for genomic analyses.
Python UpdatedJan 16, 2024 -
paml-tutorial Public
Forked from abacus-gene/paml-tutorialpaml documentation and tutorials
HTML GNU General Public License v3.0 UpdatedJun 30, 2023 -
getting-started-with-genomics-tools-and-resources Public
Forked from crazyhottommy/getting-started-with-genomics-tools-and-resourcesUnix, R and python tools for genomics and data science
Shell UpdatedOct 12, 2022 -
bioinformatics Public
Forked from ossu/bioinformatics🔬 Path to a free self-taught education in Bioinformatics!
UpdatedJun 8, 2022 -
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training-collection Public
Forked from sib-swiss/training-collectionCollection of bioinformatics training materials
Other UpdatedMay 6, 2022 -
training-material Public
Forked from galaxyproject/training-materialA collection of Galaxy-related training material
HTML MIT License UpdatedMay 5, 2022 -
applied-computational-genomics Public
Forked from quinlan-lab/applied-computational-genomicsApplied Computational Genomics Course at UU: Spring 2020
Creative Commons Attribution Share Alike 4.0 International UpdatedApr 12, 2022 -
alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedMar 26, 2022 -
biofx_python Public
Forked from kyclark/biofx_pythonCode for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
Python MIT License UpdatedMar 13, 2022 -
RoseTTAFold Public
Forked from RosettaCommons/RoseTTAFoldThis package contains deep learning models and related scripts for RoseTTAFold
Python MIT License UpdatedMar 3, 2022 -
vsn-pipelines Public
Forked from vib-singlecell-nf/vsn-pipelinesA repository of pipelines for single-cell data in Nextflow DSL2
Nextflow GNU General Public License v3.0 UpdatedFeb 10, 2022 -
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MMseqs2 Public
Forked from soedinglab/MMseqs2MMseqs2: ultra fast and sensitive search and clustering suite
C GNU General Public License v3.0 UpdatedJul 26, 2021 -
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HiC-Pro Public
Forked from nservant/HiC-ProHiC-Pro: An optimized and flexible pipeline for Hi-C data processing
Python Other UpdatedJul 13, 2021 -
zigzigEelSexchr Public
Forked from lurebgi/zigzigEelSexchrShell GNU Affero General Public License v3.0 UpdatedJun 30, 2021 -
ALLHiC Public
Forked from tangerzhang/ALLHiCALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
Perl UpdatedJun 22, 2021 -
R_for_Data_Science Public
Forked from perlatex/R_for_Data_ScienceMaterials for teaching R and tidyverse
TeX UpdatedJun 15, 2021 -
eggnog-mapper Public
Forked from eggnogdb/eggnog-mapperFast genome-wide functional annotation through orthology assignment
Python GNU Affero General Public License v3.0 UpdatedJun 8, 2021 -
atlas Public
Forked from maizeumn/atlasRNA-Seq and Proteomic Atlas of Maize Development
R UpdatedMay 28, 2021 -
ASEReadCounter_star Public
Forked from gimelbrantlab/ASEReadCounter_starPreprocessing sequencing data for allele-specific analysis
Python GNU General Public License v3.0 UpdatedMay 27, 2021 -
tripal Public
Forked from tripal/tripalThe Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other …
PHP GNU General Public License v2.0 UpdatedMay 17, 2021 -
raxml-ng Public
Forked from amkozlov/raxml-ngRAxML Next Generation: faster, easier-to-use and more flexible
C++ GNU Affero General Public License v3.0 UpdatedApr 30, 2021 -
WASP Public
Forked from bmvdgeijn/WASPWASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery
Python Apache License 2.0 UpdatedApr 23, 2021 -
3d-dna Public
Forked from aidenlab/3d-dna3D de novo assembly (3D DNA) pipeline
Shell MIT License UpdatedMar 18, 2021 -
awesome-R Public
Forked from qinwf/awesome-RA curated list of awesome R packages, frameworks and software.
R UpdatedMar 5, 2021 -
Finder Public
Forked from sagnikbanerjee15/FinderA fully automated gene annotator from RNA-Seq expression data
Perl MIT License UpdatedFeb 24, 2021
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