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tslmm Public
Forked from hanbin973/tslmmLinear mixed models on ARGs
Jupyter Notebook UpdatedJun 13, 2025 -
tskit Public
Forked from tskit-dev/tskitPopulation-scale genomics
Python MIT License UpdatedMay 8, 2025 -
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stdpopsim_cattle_rec_map Public
Converting published recombination maps for cattle for stdpopsim
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stdpopsim Public
Forked from popsim-consortium/stdpopsimA library of standard population genetic models
Python GNU General Public License v3.0 UpdatedApr 11, 2025 -
stdpopsim_analysis2_manuscript Public
Forked from popsim-consortium/analysis2_manuscriptmanuscript repo for the paper describing selection additions and analysis
TeX UpdatedMar 21, 2025 -
GorjancShell Public
Gregor Gorjanc's shell functions and scripts
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RandPedPCA Public
Forked from HighlanderLab/RandPedPCAPrincipal Component Analysis of Pedigree Relationship Matrix via Randomized SVD
Jupyter Notebook UpdatedMar 16, 2025 -
amartin_born2guide_seq Public
Forked from AudreyAAMartin/Born2Guide_script_GSEScript for the Born2Guide genotype strategy simulation
R UpdatedJan 21, 2025 -
AlphaSimR Public
Forked from gaynorr/AlphaSimRR package for breeding program simulations
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relate Public
Forked from MyersGroup/relateSoftware for estimating genome-wide genealogies for thousands of samples
C++ Other UpdatedNov 13, 2024 -
tstrait Public
Forked from tskit-dev/tstraitQuantitative trait simulation for ARGs
Python MIT License UpdatedOct 7, 2024 -
ts_tutorials Public
Forked from tskit-dev/tutorialsA set of tutorials for msprime and tskit.
Jupyter Notebook Creative Commons Attribution 4.0 International UpdatedOct 7, 2024 -
adding-species-manuscript Public
Forked from popsim-consortium/adding-species-manuscriptmanuscript materials for the adding species paper
HTML UpdatedJun 16, 2024 -
what-is-an-arg-paper Public
Forked from tskit-dev/what-is-an-arg-paperManuscript and code for the "What is an ARG?" paper
TeX UpdatedApr 23, 2024 -
pedigreeTools Public
Forked from Rpedigree/pedigreeToolsR functions related to pedigrees
R GNU General Public License v3.0 UpdatedApr 5, 2024 -
r-ctv-agriculture Public
Forked from cran-task-views/AgricultureCRAN Task View: Agricultural Science
R UpdatedDec 18, 2023 -
tree_seq_pipeline Public
Forked from HighlanderLab/tree_seq_pipelinePipeline to infer tree sequences with different datasets
Python MIT License UpdatedNov 17, 2023 -
gRain Public
Forked from hojsgaard/gRainR package for gRaphical independence networks (Bayesian networks)
R GNU General Public License v2.0 UpdatedJul 24, 2022 -
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msprime-1.0-paper Public
Forked from tskit-dev/msprime-1.0-paperPublication describing msprime 1.0
TeX UpdatedAug 16, 2021 -
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cpumemlog Public
Monitor CPU and RAM 3150 usage of a process (and its children)
2 UpdatedNov 22, 2016
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