Tags: hetio/hetnetpy
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hetio/hetio v0.2.11 =================== Final release before this package is renamed to hetnetpy from hetio. See <#40> for more information on the renaming. `import hetio` will raise a DeprecationWarning. Users are recommended to switch to hetnetpy or downgrade to v0.2.10 to avoid the warning. There are no functional changes in this release.
hetio/hetio v0.2.10 =================== May 2019 release with convenience functions and other enhancements. Changes ------- Consistent metanode/metaedge/metapath .abbrev property #27 permute_pair_list: default to inplace=False #28 Add construct_pdp_query to build cypher queries for PDP #30 #33 #34 #36 Improve imports to be lazy / less likely to throw errors #31 #32 #35 Migrate neo4j nomenclature to hetnet module #37 is_symmetric method for metapaths #38 #39
hetio/hetio v0.2.9 Relocate GitHub repository from dhimmel/hetio to hetio/hetio. Support path-like obojectes in readwrite. 21c6443 extract_all_metapaths: get all metapaths for any source/target metanodes #14 sparsify_or_densify: workaround scipy float16 todense bug #15 MetaGraph: metanode and metaedge getter methods #18 MetaGraph: metagraph.get_metapath #19 Optimize matrix.sparsify_or_densify #20 graph.count_nodes & matrix.get_node_identifiers functions #21 Enable edge/path sorting Enable deterministic extract_metapaths ordering #22
dhimmel/hetio v0.2.7 Add subgraph functionality. `graph.get_subgraph()` allows subseting a hetnet to return a new hetnet. This can be useful for creating hetnets for testing or development. Subgraphs of Hetionet v1.0 have been added to `test/data`. Fixes a bug that caused AttributeError when calling `metapath.get_unicode_str()`. 62c4dd1
dhimmel/hetio v0.2.6 hetio.hetnet.Graph.add_edge() now accepts nodes in addition to node_ids as input to source_id and target_id. hetio.hetnet documentation improvements. Fix node display in Jupyter notebooks. Previously, edge information was printed causing notebooks to crash. Test coverage for path count and degree-weighted path count computation.
dhimmel/hetio v0.2.5: test @hetio-release-bot deploy @hetio-release-bot is an account for automatically deploying GitHub releases from Travis CI. It's purpose is to limit the scope of GitHUb's OAuth to a single repository.
dhimmel/hetio v0.2.4: readwrite and dependencies updates Removes YAML support for writing metagraphs and graphs. Improves reliability of reading json or pickle files with or without compression. Support xz compression. Improve readwrite test coverage.
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