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meco_pipeline Public
Bioinformatics pipelines for microbial ecology
Python MIT License UpdatedMar 4, 2025 -
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ShotgunMGUtils Public
Utilities to organize and query results from the ShotgunMG pipeline.
Python UpdatedApr 4, 2023 -
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ShotgunMG Public
This repository contains the code for ShotgunMG, a Nextflow bioinformatic pipeline for high-resolution metagenomics
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MiRNATarget Public
A command line version of the psRNATarget workflow that predicts potential miRNA target locations on a genome.
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microbiomeutils Public
Python utility to generate distance matrices, perform PCoAs and generate taxonomic summaries using simple tab-separated feature tables.
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bioperl-live Public
Forked from bioperl/bioperl-liveCore BioPerl 1.x code
Perl UpdatedApr 27, 2022 -
bioinformatics-training Public
This is a code repository hosting code for bioinformatics training purposes.
Python UpdatedApr 6, 2021 -
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RDP-training-sets Public
This repo hosts scripts related to RDP training set generation and formatting
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PipelineViewer Public
D3.js project to view bioinformatics pipelines with force graphs.
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