Stars
Calibrated inference of spiking from calcium ΔF/F data using deep networks
Tools for motion correcting, compressing, demixing and visualizing single cell functional imaging data
Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-implemented models belong to the family of neural population …
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
This Python library makes it easy to display images and videos in a notebook.
λDesigner is an EDSL for TouchDesigner
Code repository for Emotiv Academy's innovative projects and educational resources
Segment Anything for Microscopy
A Python implementation of global optimization with gaussian processes.
Course material for the 2025 edition of the Statistical Neuroscience course
Measure PSF FWHM along different axes
Visualize, share and annotate your large 3D images online
Animal-AI supports interdisciplinary research to help better understand human, animal, and artificial cognition.
Code repository for the Animal AI Olympics competition
The 2024 edition of The Nature of Code with p5.js. Includes Notion workflow and build system.
A guide to learn and become active in the demoscene within a couple of weeks
Tools for preprocessing 2p calcium imaging data
Evaluate the model for the translocator project
A curated list of code and resources for computer-controlled drawing machines and other visual art robots.
A Community-led Hyper-Hackable Text Editor