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ex2p Public
Extra lens mount for stretching and excitation of neurons by optogenetic stimulation
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nd2 Public
Forked from tlambert03/nd2Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 10, 2024 -
asovi-core Public
Python library to control hardwares for neuroscience study
MIT License UpdatedJan 12, 2024 -
Neural-Data-Analysis-Tutorials Public
Forked from yoshihito-saito/Neural-Data-Analysis-TutorialsJupyter Notebook UpdatedDec 5, 2023 -
pymoten Public
Forked from gallantlab/pymotenMotion energy features from video
Python BSD 2-Clause "Simplified" License UpdatedMar 7, 2023 -
rimec Public
functional imaging and extra cellular recording processing codes
Jupyter Notebook MIT License UpdatedSep 17, 2022 -
optinist Public
Forked from oist/optinistcalcium imaging pipeline tool
TypeScript GNU General Public License v3.0 UpdatedJul 11, 2022 -
MScanLab Public
Unofficial Matlab codes for ".MDF" data made by MScan and MView (inc. Sutter instruments).
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allenCCF Public
Forked from cortex-lab/allenCCFTools to work with Allen Inst CCF data in matlab
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SOLR Public
Forked from KamitaniLab/SOLRMatlab and Python code for sparse ordinal logistic regression (SOLR).
MATLAB MIT License UpdatedOct 15, 2019 -
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ReadImageJROI Public
Forked from DylanMuir/ReadImageJROIMatlab function to import ROIs from ImageJ
MATLAB UpdatedFeb 24, 2017 -
NoRMCorre Public
Forked from flatironinstitute/NoRMCorreMatlab routines for online non-rigid motion correction of calcium imaging data
MATLAB GNU General Public License v2.0 UpdatedFeb 22, 2017 -
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Suite2P Public
Forked from cortex-lab/Suite2PTools for processing 2P recordings
MATLAB UpdatedNov 3, 2016 -
oopsi Public
Forked from jovo/oopsiup-to-date code for model-based inference of spike trains from calcium imaging
MATLAB Apache License 2.0 UpdatedOct 31, 2016 -
seekRFs Public
Application for hand mapping of receptive fields of neurons in visual cortex
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continuous_time_ca_sampler Public
Forked from epnev/continuous_time_ca_samplerThe code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
MATLAB GNU General Public License v2.0 UpdatedOct 21, 2016 -
ezROI Public
interactive interface for making ROI for image segmentation
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TuningCurveFitter Public
library for major fitting function for neuroscience
MATLAB GNU General Public License v3.0 UpdatedJan 22, 2016 -
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emacs-color-themes Public
Forked from owainlewis/emacs-color-themesA collection of custom and ST2 themes for Emacs. All the themes are named after personal programming and tech heroes.
Emacs Lisp UpdatedFeb 17, 2015 -
CRF-Mapro Public
The sketch for mapping CRF with Processing [http://processing.org]
Java UpdatedAug 6, 2014 -
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Concole_ChangePrimaryDisplay Public
Windows application for change primary display
C# BSD 3-Clause "New" or "Revised" License UpdatedMar 4, 2014 -
matlab-emacs Public
Forked from ruediger/matlab-emacsMajor mode for Emacs for editing MATLAB code, and running MATLAB in an inferior shell. (forked on http://sourceforge.net/projects/matlab-emacs/) by Ryosuke Takeuchi 2014-02-07
Emacs Lisp UpdatedDec 18, 2013 -
matlab-snippets Public
snippet files for yasnippet in matlab-mode //for Emacs
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