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PupilSense Public
Forked from stevenshci/PupilSensePupil size tracking pipeline based on PupilSense
Python MIT License UpdatedJun 6, 2025 -
Cascade Public
Forked from HelmchenLabSoftware/CascadeCalibrated inference of spiking from calcium ΔF/F data using deep networks
Jupyter Notebook GNU General Public License v3.0 UpdatedMay 22, 2025 -
jnormcorre Public
Forked from apasarkar/jnormcorreJax implementation of normcorre
Python GNU General Public License v2.0 UpdatedMay 12, 2025 -
WarpedVisualStim Public
Forked from zhuangjun1981/WarpedVisualStimFor displaying spherically corrected visual stimulus on a flat screen.
Python GNU General Public License v3.0 UpdatedApr 24, 2025 -
roiextractors Public
Forked from catalystneuro/roiextractorsPython-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 22, 2025 -
measurePSF Public
Forked from SWC-Advanced-Microscopy/multiphoton-qcMeasure PSF FWHM along different axes
MATLAB GNU Lesser General Public License v3.0 UpdatedApr 2, 2025 -
Fiji-macro Public
Libray for ImageJ/Fiji macro
ImageJ Macro BSD 2-Clause "Simplified" License UpdatedMar 21, 2025 -
LaunchVSCodeTunnel Public
Script to launch VS Code Tunnel on HPC
Shell BSD 2-Clause "Simplified" License UpdatedFeb 28, 2025 -
NotionBlueprint Public
A Python library to integrate Notion and NeuroBlueprint
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 17, 2025 -
2p-preprocess Public
Forked from znamlab/2p-preprocessTools for preprocessing 2p calcium imaging data
Python UpdatedJan 6, 2025 -
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Khilkevich_Lohse_2024 Public
Forked from BaselLaserMouse/Khilkevich_Lohse_2024Jupyter Notebook UpdatedSep 19, 2024 -
glm-hmm Public
Forked from zashwood/glm-hmmCode to run GLM-HMM on IBL and dmdm data using SWC's HPC
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SLM-3dPointCloud Public
Forked from ppozzi/SLM-3dPointCloudPython library for generating 3d point cloud holograms, with phase only spatial light modulators, in real time through a GPU implementation of 5 algorithms (Random superposition, Gerchberg-Saxton, …
Python GNU General Public License v3.0 UpdatedJul 8, 2024 -
rt_model_orsolic Public
Forked from znamlab/rt_model_orsolic -
ssm Public
Forked from zashwood/ssmBayesian learning and inference for state space models
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oscmex Public
Forked from kronihias/oscmexosc functionality for MATLAB using liblo
C UpdatedDec 19, 2023 -
glmhmm Public
Forked from irisstone/glmhmmcode to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
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task-leaderboard Public
A leaderboard of highest score points of the psychophysical task
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DeepCGH Public
Forked from UNC-optics/DeepCGHA Python/TensorFlow implementation of DeepCGH, a framework for unsupervised deep learning-based computer-generated holography.
Python Other UpdatedFeb 9, 2023 -
HumanRAFT Public
RAFT-based optical flow estimation to detect moving humans
BSD 3-Clause "New" or "Revised" License UpdatedJan 27, 2023 -
FuturePredictionProcessing Public
Introduction to PyTorch and ViT
Dockerfile BSD 3-Clause "New" or "Revised" License UpdatedJan 27, 2023 -
LastBlackBox Public
Forked from NoBlackBoxes/LastBlackBoxA course for brains interested in brains (not tools interested in tools)
Jupyter Notebook Other UpdatedJan 25, 2023 -
npy-matlab Public
Forked from kwikteam/npy-matlabExperimental code to read/write NumPy .NPY files in MATLAB
Jupyter Notebook BSD 2-Clause "Simplified" License UpdatedJan 24, 2023 -
zebrafish Public template
Forked from seung-lab/zebrafish🎨 Simplistic, responsive jekyll based open source theme
Liquid MIT License UpdatedNov 11, 2022 -
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EMAnnotationSchemas Public
Forked from CAVEconnectome/EMAnnotationSchemasRepository to hold schemas for annotations of volumetric imaging data focused on EM
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LiteFlowNet2 Public
Forked from twhui/LiteFlowNet2A Lightweight Optical Flow CNN - Revisiting Data Fidelity and Regularization, TPAMI 2020
Python Other UpdatedMay 17, 2022 -
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EMsegmentation-mito Public
EM segmentation of mitochondria from SNEMI3D data
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