bacteria
Here are 11 public repositories matching this topic...
A simple pipeline for bacterial assembly and quality control
-
Updated
Jun 19, 2025 - Nextflow
A nextflow pipeline for performing bacterial RNA-Seq data analysis.
-
Updated
Jan 16, 2025 - Nextflow
Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow
-
Updated
Oct 15, 2024 - Nextflow
avantonder/assembleBAC-ONT is a bioinformatics pipeline that de novo assembles and annotates Oxford Nanopore (ONT) long-read sequence data.
-
Updated
Jun 18, 2025 - Nextflow
bacQC is a bioinformatics analysis pipeline for assessing the quality of bacterial isolate sequence data
-
Updated
Jun 15, 2025 - Nextflow
bacQC-ONT is a bioinformatics pipeline for the assessment of Oxford Nanopore sequence data
-
Updated
Jun 18, 2025 - Nextflow
A Nextflow pipeline for performing bacterial RNA-Seq analysis without a reference genome.
-
Updated
Nov 16, 2024 - Nextflow
avantonder/assembleBAC is a bioinformatics best-practise analysis pipeline for assembling and annotating bacterial genomes.
-
Updated
Jun 18, 2025 - Nextflow
A nextflow workflow to build referenceseeker DBs on the fly
-
Updated
Oct 5, 2022 - Nextflow
Nextflow pipeline incorporating the TRACS alignment step alone
-
Updated
Mar 25, 2025 - Nextflow
Improve this page
Add a description, image, and links to the bacteria topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the bacteria topic, visit your repo's landing page and select "manage topics."