Comprehensive design of CRISPR gRNAs for nucleases and base editors
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
a guideRNA database generation tool
Collection of R packages that work in harmony for CRISPR gRNA design
CRISPR, faster, better – The Crackling method for whole-genome target detection
Tutorials for the crisprVerse
Visualization of CRISPR guide RNAs (gRNAs)
A guideRNA design tool for the modern era.
CRISPR Guide RNA Designer
Base functions and classes for CRISPR gRNA design
Useful human and mouse data for the crisprVerse ecosystem
A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
Bowtie-based alignment of CRISPR gRNA spacer sequences
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
Pre-trained models for the crisprScore package
Shiny interface for CRISPR gRNAs designed with the crisprVerse
BWA-based alignment of CRISPR gRNA spacer sequences
Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+
⛓️ Automating construction of oligo library sequences for oligo array synthesis.
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