Package for processing and analyzing glycans and their role in biology.
Graph convolutional neural networks for analyzing glycans [LEGACY; use glycowork implementation]
A Python framework for the rapid modeling of glycans
GlyCombo, a combinatorial glycan composition assignment tool
Deep learning model to predict interactions between proteins and glycans [LEGACY; use glycowork implementation]
A glycogene ontology describing the functions they perform and their involvement in glycosylation pathways
Community-curated list of software packages and data resources for Glycoscience
R scripts for analysis of DI-, GC- and LC-MS data
Glycan Informed Foundational Framework for Learning Abstract Representations, based on Combinatorial Complexes and Heterogeneous GNNs
R package for calculation and mass spectrometry annotation of glycans
R package for annotation of glycans in MS1 and MS2 data
GNN model to learn latent space representations of glycans on an atomic level
This repository includes the codes used for channel capacity calculation present in Fuchsberger et al. paper.
Script for quantification of glucosaminoglycans (GAGs) based on Proteome Discoverer output, with web-interface powered by Bokeh
Command line executable tool to calculate all possible glycan molecules and the m/z values of their ions given a set up input parameters.
Find glycopeptide peptide sequences in protein FASTA files.
Canonicalize glycan sequences via a web app
Predicting single-cell glycosylation features from scRNA-seq
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