8000 fix: Add missed source files to mso target and fix name of targets by Czaki · Pull Request #51 · 4DNucleome/PartSegCore-compiled-backend · GitHub
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fix: Add missed source files to mso target and fix name of targets #51

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Merged
merged 1 commit into from
Oct 25, 2024
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fix: Add missed source files to mso target and fix name of targets #51

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24 changes: 15 additions & 9 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -43,15 +43,15 @@ target_include_directories(path_sprawl_cython PRIVATE "${NUMPY_INCLUDE_DIR}")
target_include_directories(path_sprawl_cython PRIVATE src/PartSegCore_compiled_backend/sprawl_utils/)

cython_transpile(src/PartSegCore_compiled_backend/sprawl_utils/sprawl_utils.pyx LANGUAGE CXX OUTPUT_VARIABLE sprawl_utils_cython_cxx)
python_add_library(sprawl_utils_cython MODULE "${sprawl_utils_cython_cxx}" WITH_SOABI)
target_include_directories(sprawl_utils_cython PRIVATE "${NUMPY_INCLUDE_DIR}")
target_include_directories(sprawl_utils_cython PRIVATE src/PartSegCore_compiled_backend/sprawl_utils/)
python_add_library(sprawl_utils MODULE "${sprawl_utils_cython_cxx}" WITH_SOABI)
target_include_directories(sprawl_utils PRIVATE "${NUMPY_INCLUDE_DIR}")
target_include_directories(sprawl_utils PRIVATE src/PartSegCore_compiled_backend/sprawl_utils/)


cython_transpile(src/PartSegCore_compiled_backend/sprawl_utils/fuzzy_distance.pyx LANGUAGE CXX OUTPUT_VARIABLE fuzzy_distance_cython_cxx)
python_add_library(fuzzy_distance_cython MODULE "${fuzzy_distance_cython_cxx}" WITH_SOABI)
target_include_directories(fuzzy_distance_cython PRIVATE "${NUMPY_INCLUDE_DIR}")
target_include_directories(fuzzy_distance_cython PRIVATE src/PartSegCore_compiled_backend/sprawl_utils/)
python_add_library(fuzzy_distance MODULE "${fuzzy_distance_cython_cxx}" WITH_SOABI)
target_include_directories(fuzzy_distance PRIVATE "${NUMPY_INCLUDE_DIR}")
target_include_directories(fuzzy_distance PRIVATE src/PartSegCore_compiled_backend/sprawl_utils/)


cython_transpile(src/PartSegCore_compiled_backend/color_image_cython.pyx LANGUAGE CXX OUTPUT_VARIABLE color_image_cython_cxx)
Expand All @@ -65,7 +65,13 @@ target_include_directories(calc_bounds PRIVATE "${NUMPY_INCLUDE_DIR}")


cython_transpile(src/PartSegCore_compiled_backend/multiscale_opening/mso_bind.pyx LANGUAGE CXX OUTPUT_VARIABLE mso_bind_cython_cxx)
python_add_library(mso_bind MODULE "${mso_bind_cython_cxx}" WITH_SOABI)
python_add_library(
mso_bind MODULE
"${mso_bind_cython_cxx}"
# src/PartSegCore_compiled_backend/multiscale_opening/mso.cpp
src/PartSegCore_compiled_backend/multiscale_opening/mso.h
src/PartSegCore_compiled_backend/multiscale_opening/my_queue.h
WITH_SOABI)
target_include_directories(mso_bind PRIVATE src/PartSegCore_compiled_backend/multiscale_opening/)
target_include_directories(mso_bind PRIVATE "${NUMPY_INCLUDE_DIR}")

Expand All @@ -84,8 +90,8 @@ target_link_libraries(_napari_mapping PRIVATE OpenMP::OpenMP_CXX)

install(TARGETS euclidean_cython DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS path_sprawl_cython DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS sprawl_utils_cython DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS fuzzy_distance_cython DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS sprawl_utils DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS fuzzy_distance DESTINATION PartSegCore_compiled_backend/sprawl_utils)
install(TARGETS color_image_cython DESTINATION PartSegCore_compiled_backend)
install(TARGETS calc_bounds DESTINATION PartSegCore_compiled_backend)
install(TARGETS mso_bind DESTINATION PartSegCore_compiled_backend/multiscale_opening)
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