Here are
25 public repositories
matching this topic...
Syntax highlighting for computational biology
Updated
Mar 4, 2023
Shell
VAPiD: Viral Annotation and Identification Pipeline
Updated
May 29, 2024
Shell
Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you need is a reference genome and some short reads
Updated
Nov 25, 2024
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Utilities for analyzing next generation sequencing data.
Updated
May 7, 2021
Shell
Generate statistics from FASTQ and FASTA files. Also manipulate sequences such as renaming contigs and converting FASTQ to FASTA. Written in Bash. All in one place.
Updated
Mar 28, 2023
Shell
Donut: automated Circos visualization of multiple fasta files within a docker image
Updated
Jun 15, 2017
Shell
Improve your metagenomic reference sequence: Simple adapter and contamination FASTA masking using bowtie2 and bedtools
Updated
Dec 9, 2021
Shell
A small collection of one-liners in a one bash script for fasta files processing.
Updated
Feb 2, 2021
Shell
The official Seqs-Extractor Repository
Updated
Dec 15, 2023
Shell
simple and convenient program to convert fasta sequences to fastq sequences
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fasta sequence fastq-format fastq fasta-sequences fq fastq-files fasta-format
Updated
May 13, 2020
Shell
BASH scripts to extract information from FASTA files.
Updated
May 11, 2023
Shell
FastEAR - Fast(er) Extraction of Alignment Regions from FASTA
Updated
Sep 11, 2024
Shell
Repository for the course "Introduction to Bioinformatics" from the Undergraduate Program in Genomic Sciences, UNAM.
Updated
Jul 27, 2024
Shell
Updated
Sep 23, 2024
Shell
get bed file for N bases from a FASTA file
Updated
Mar 14, 2022
Shell
jellyfish wrapper to extract unique kmers in fasta file compared to background set
Updated
Sep 26, 2017
Shell
The VIM-based multiple sequence alignment (MSA) editor.
Updated
Feb 1, 2019
Shell
Comparative Analysis of DNA sequencing Algorithm
Updated
Dec 28, 2020
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Bioinformatics projects and linux scripts.
Updated
Jun 11, 2021
Shell
Updated
Jun 4, 2023
Shell
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