What's Changed
- Prepare for post-1.17.0 development by @tapastro in #9025
- JP-3784: Fix off-nominal pixel_replace and cube_build output names by @melanieclarke in #9019
- Add suffix for SIRS refpix output so it can be okified by @melanieclarke in #9027
- Bugfix for SIRS reference pixel subtraction by @drlaw1558 in #9037
- JP-3664: Fix pixel replace numpy 2.0 issues by @drlaw1558 in #9004
- Update CRDS cache workflow usage to reduce random failures by @braingram in #9040
- JP-3834: Update default values for the source finding in tweakreg to match the algorithm by @mcara in #9036
- Metadata updates for 1.17.1 by @jhunkeler in #9043
- Fix GWCS failures due to the API spring cleaning PR by @WilliamJamieson in #8965
- try to ignore requirements-sdp.txt for dependabot by @braingram in #9051
- JP-3822: restructure outlier detection unit tests by @emolter in #9052
- JP-3794: Add trace-based extraction option for NIRSpec by @hayescr in #9022
- Update CODEOWNERS and remove unused files by @braingram in #9055
- Update MRS photom documentation by @drlaw1558 in #9065
- JP-3840: Include gwcs install warning and stasis install details by @tapastro in #9066
- Fix extract_1d unit test failure under numpy 2 by @melanieclarke in #9069
- JP-1649: Add option for user-defined sky levels in skymatch by @emolter in #9053
- JP-3838: Update README description of CRDS setup by @drlaw1558 in #9078
- JP-3769: Add code style F, E, W rules by @emolter in #9076
- JP-3755: Remove unused options and add unit tests to SOSS extraction algorithm by @emolter in #9000
- remove no longer needed warning filter by @braingram in #9084
- JP-3829: Add flat handling to clean_flicker_noise by @melanieclarke in #9064
- Convert np.int to int for logging in numpy 2 by @melanieclarke in #9101
- JP-3664: Testing changes for numpy 2.0 compatibility by @tapastro in #8718
- JP-3769: Style rules example case by @emolter in #9081
- Fix msa frame transform for opaque images by @melanieclarke in #9102
- build sdist with python 3.13 (point to workflow fork) by @braingram in #9106
- Move mypy type hint checking into pre-commit by @emolter in #9108
- JP-3862: Apply code style to pixel_replace module by @tapastro in #9107
- JP-3851: Remove fits_generator by @emolter in #9111
- Remove unused .flake8 config file by @emolter in #9115
- Add Codespell to pre-commit by @emolter in #9097
- Fix sonar scan failures on AMI changes by @emolter in #9112
- Emicorr speedup by @t-brandt in #9077
- Style fixes for assign_mtwcs by @emolter in #9113
- JP-251: Optimal extraction support for MIRI LRS by @melanieclarke in #8967
- JP-3859: Apply code style to clean_flicker_noise and nsclean by @melanieclarke in #9114
- drop support for python 3.10 by @braingram in #9116
- Fix code style in outlier detection by @emolter in #9127
- JP-3777: Select first and last groups in ramp fitting by @stscirij in #9095
- JP-3697: Jump Step Refactor by @kmacdonald-stsci in #9039
- Remove tomli, no longer relevant for 3.11 by @emolter in #9133
- set stcal to main, allow python 3.13 by @braingram in #9105
- JP-3859: Apply code style rules to msaflagopen by @melanieclarke in #9124
- Bump actions/setup-python from 5.3.0 to 5.4.0 by @dependabot in #9134
- Bump OpenAstronomy/github-actions-workflows from 1.15.0 to 1.16.0 by @dependabot in #9135
- JP-3116: Do not create observation-only Level 2 associations if part of a background candidate by @tapastro in #9098
- Add line length ignores for spec strings by @emolter in #9139
- Apply code style rules to source_catalog by @emolter in #9138
- Fix formatting error by @melanieclarke in #9142
- replace usage of
random.random()withnp.random.random()by @zacharyburnett in #9137 - JP-3796: Scale barshadow correction to long slits by @melanieclarke in #9085
- JP-3827: Remove unused error from ramp data by @melanieclarke in #9109
- Apply code style rules to tweakreg by @emolter in #9130
- Apply code style rules to badpix_selfcal by @emolter in #9140
- JP-3830: MRS residual cosmic ray shower straylight correction by @drlaw1558 in #9126
- Apply code style rules to datamodels submodule by @emolter in #9131
- Apply code style rules to stpipe by @emolter in #9150
- Correct error in MSA metadata coordinate description by @hayescr in #9154
- Apply code style rules to wfss_contam by @emolter in #9151
- Apply basic code style changes to lastframe step by @jemorrison in #9147
- Replace hidden wcs pipeline attribute with public one by @emolter in #9165
- Apply code style rules to soss_extract by @emolter in #9156
- Xfail test_fgs_guider until CRDS files are repaired by @tapastro in #9169
- Update codestyle for first frame step by @jemorrison in #9170
- JP-3859: Apply code style rules to combine_1d by @melanieclarke in #9121
- JP-3859: Apply code style rules to master_background by @melanieclarke in #9123
- Apply code style rules to model_blender by @emolter in #9157
- JP-3856: Style Updates for Group Scale by @kmacdonald-stsci in #9163
- JP-3856: Code Style Updates to Jump Step by @kmacdonald-stsci in #9159
- JP-3856: Style Updates for Ramp Fitting by @kmacdonald-stsci in #9158
- JP-3855: Style Updates for DQ init by @kmacdonald-stsci in #9161
- JP-3856: Style Updates for Charge Migration by @kmacdonald-stsci in #9162
- increase minimum version of asdf-astropy by @braingram in #9177
- JP-3765: Update documentation of ramp fitting step arguments by @drlaw1558 in #9176
- JP-3859: Apply code style rules to wavecorr by @melanieclarke in #9128
- Move common resample code to stcal by @mcara in #8986
- JP-3879: Fix resample failure to ingest single datamodels from file by @emolter in #9183
- JP-3856: Style Updates for Gain Scale by @kmacdonald-stsci in #9164
- JP-3786: Remove hard assigning NON_SCIENCE to DO_NOT_USE in flatfield by @drlaw1558 in #9174
- Fix a bug in resampled_wcs_from_models by @mcara in #9186
- Apply code style rules to pipelines by @emolter in #9144
- Use skymatch from stcal by @WilliamJamieson in #8901
- Fix unsafe initialization of CubeModel from ImageModel by @emolter in #9192
- JP-3815: Add support for selecting a list of slit names or source ids… by @stscirij in #9171
- Document crpix convention for resample step by @mcara in #9195
- Apply code style checks to skymatch step by @emolter in #9202
- JP-3852 and JP-3853: Fix imprint associations for NRS IFU by @melanieclarke in #9190
- Document image group usage for sky matching by @mcara in #9080
- Fix test for custom WCS for imaging by @mcara in #9017
- JP-3861: Apply code style changes for pathloss step by @stscirij in #9203
- use astropy for interpret_bit_flags by @braingram in #9212
- JP-3808: Store scaling factor for WFSS data in background step by @emolter in #9204
- JP-3744: set outlier step default to in-memory processing by @emolter in #9214
- JP-3812: Add output_ext documentation by @melanieclarke in #9224
- replace uses of DataModel.write with save by @braingram in #9219
- JP-3859: Apply code style rules to extract_1d by @melanieclarke in #9194
- JP-3862: Clean up guider_cds step for code style and CRDS inconsistencies by @tapastro in #9141
- Fix interpolated flat suffix in MOS/FS case by @melanieclarke in #9209
- JP-3897: Fix bad input type to median computation for cubemodels in outlier detection by @emolter in #9227
- JP-3858-exp_to_source by @penaguerrero in #9201
- JP-3691: Add links to JDox by @melanieclarke in #9228
- JP-3773: Store logs from calibration pipeline in datamodel by @braingram in #9211
- test with latest supported Python version by @zacharyburnett in #9217
- Remove mention of unused SOSS reference files in docs by @emolter in #9041
- JP-3811: Update imprint documentation to mention association input by @melanieclarke in #9222
- Apply basic code style checks to test configuration files by @emolter in #9146
- Fix inaccurate warning message for median_error computation by @melanieclarke in #9247
- JP-3608: Document slit low/high parameters by @melanieclarke in #9223
- JP-3789 Add more FITS comparison support for regression tests by @penaguerrero in #9082
- JP-3790 add residual fringe correction to extract1d table by @jemorrison in #9073
- JP-3858-superbias by @penaguerrero in #9232
- JP-3848 MIRI LRS s_region and resample WCS by @jemorrison in #9193
- mention cal_logs in docs by @braingram in #9257
- JP-3858-srctype by @penaguerrero in #9239
- JP-3858-white_light by @penaguerrero in #9241
- Add flexible log_watcher fixture by @melanieclarke in #9262
- JP-3790: apply aperture correction of residual fringe corrected data by @jemorrison in #9260
- JP-3915: Bugfix to SIRS kernel subtraction by @drlaw1558 in #9267
- Apply code style rules to resample by @emolter in #9248
- JP-3857 update reset step to new code style rules by @jemorrison in #9264
- JP-3896: Deprecate or remove various assign_wcs utility functions by @emolter in #9221
- JP-3597: Add new algorithm for EMI fit; clean up existing code by @melanieclarke in #9216
- JP-3913: Add sirskernel to refpix reference types by @melanieclarke in #9261
- Import stdatamodels warnings from new exceptions namespace by @emolter in #9280
- JP-3917: Apply code style rules to engdblog by @pllim in #9276
- JP-3860: Apply code style rules to assign_wcs by @emolter in #9255
- Jp 3861 refpix style by @stscirij in #9234
- JP-3500: Associate pure parallel WFSS grism images with long wave direct images by @tapastro in #9277
- JP-3914: Catch incomplete extraction gracefully by @melanieclarke in #9266
- actually remove script as followup to #8957 by @zacharyburnett in #9289
- JP-3901: Enable Detector1Pipeline processing of DHS data by @tapastro in #9243
- JP-3900: Tests, clean up, and code style for residual_fringe by @melanieclarke in #9242
- JP-3901: Bugfix and regression coverage by @tapastro in #9304
- metadata for
1.18.0rc1by @zacharyburnett in #9306 - Backport PR #9326 on branch release/1.18.x (JP-3953: Extrapolate barshadow correction to cover wavelength gaps) by @meeseeksmachine in #9335
- Backport PR #9338 on branch release/1.18.x (Fix inadvertent removal of all) by @meeseeksmachine in #9339
- Backport PR #9337 on branch release/1.18.x (JP-3947 Fix MIRI LRS Flux error) by @meeseeksmachine in #9344
- Backport PR #9301 on branch release/1.18.x (JP-3686: Test using source catalog output as tweakreg abs_refcat) by @meeseeksmachine in #9346
- Metadata for 1.18.0rc2 by @jhunkeler in #9354
- Backport PR #9361 on branch release/1.18.x (JP-3978: Allow unequal number of target and psf exposures in calwebb_ami3) by @meeseeksmachine in #9363
- Revert "Backport PR #9301 on branch release/1.18.x (JP-3686: Test using source catalog output as tweakreg abs_refcat)" by @tapastro in #9375
- Metadata for release 1.18.0 by @jhunkeler in #9374
- Metadata release 1.18.0 (sdp) by @jhunkeler in #9379
New Contributors
- @meeseeksmachine made their first contribution in #9335
Full Changelog: 1.17.0...1.18.0
Contributors
braingram, jhunkeler, and 16 other contributors