Releases: dockstore/dockstore-cli
Releases · dockstore/dockstore-cli
1.17.0
What's Changed
- fix develop nightly builds by @denis-yuen in #297
- allow nightly builds to ignore artifact uploads from feature branches by @denis-yuen in #299
- update toil and resurrect tests by @denis-yuen in #300
- Use reusable deploy artifacts workflow by @kathy-t in #298
- Compatible with (but not mandatory) Java 21 by @denis-yuen in #293
- update keylist by @denis-yuen in #302
- prep for dropwizard update in develop by @denis-yuen in #303
- core update to 1.17.0-alpha.2 by @denis-yuen in #304
- Bump org.apache.commons:commons-vfs2 from 2.9.0 to 2.10.0 in /dockstore-client by @dependabot in #305
Full Changelog: 1.16.0...1.17.0
Contributors
denis-yuen, kathy-t, and dependabot
Assets 6
1.16.0
release process
1.15.1
Contributors
david4096
Assets 5
1.15.0
See https://github.com/dockstore/dockstore/releases/tag/1.15.0 for a human-readable summary
What's Changed
- Ensuring that Dockstore Yaml Validate Rejects .dockstore.yml files that are missing or have an empty primaryDescriptorPath by @fhembroff in #235
- dropwizard 4 update by @denis-yuen in #238
- replace expired docker image by @denis-yuen in #240
- rename reports to avoid clash by @denis-yuen in #242
- add github actions for release by @denis-yuen in #241
- Remove wes checks that are never executed by @kathy-t in #245
- add auto deploy for testing by @denis-yuen in #246
- fix cron build by @denis-yuen in #247
- Remove swagger client in favour of openapi client by @denis-yuen in #249
- Check license file via GitHub action by @coverbeck in #250
- new broad artifactory location by @denis-yuen in #251
- DOCK-2323: Log source and destination paths for file provisioning by @hyunnaye in #252
- bom update by @denis-yuen in #254
- fix cron build by @denis-yuen in #253
- Re-enable failing CLI Test by @coverbeck in #256
- add broad mirror by @denis-yuen in #258
- update dockstore version by @denis-yuen in #260
- Bump actions/checkout from 3 to 4 by @dependabot in #257
- DOCK-2262: invalidates relative path yml files by @hyunnaye in #255
- update to latest 1.15 alpha by @denis-yuen in #261
- need this for failing cron with current develop by @denis-yuen in #263
- Bump actions/setup-java from 3 to 4 by @dependabot in #267
- finish deprecation of author in favour of authors array by @denis-yuen in #269
- cwlavro update (#271) by @denis-yuen in #273
- test core update by @denis-yuen in #275
Full Changelog: 1.14.0...1.15.0
Assets 5
1.15.0-beta.0
testing out release process
1.14.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
- Feature/dock 2353/hello world workflow fails by @fhembroff in #236
- DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0
Contributors
coverbeck, denis-yuen, and 7 other contributors
Assets 5
1.14.0-rc.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
- Feature/dock 2353/hello world workflow fails by @fhembroff in #236
- DOCK-2349: added error handling message for CWL JSON conversion by @hyunnaye in #237
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0-rc.0
Contributors
coverbeck, denis-yuen, and 7 other contributors
Assets 5
1.14.0-beta.0
What's Changed
- Update PR template for docs by @denis-yuen in #187
- Add review instructions by @coverbeck in #199
- Use new cromwell version by @kathy-t in #201
- clear out a few dependencies by @denis-yuen in #205
- reduce pin by @denis-yuen in #206
- assign reviewers for dependabot by @denis-yuen in #207
- SEAB-4927 Restricted postgres dependency to only test by @hyunnaye in #204
- switch to github lgtm by @denis-yuen in #208
- SEAB-5021: Confirm support for CWL Version 1.2 by @svonworl in #209
- Bump slackapi/slack-github-action from 1.19.0 to 1.23.0 by @dependabot in #192
- java 17 and compile issue with trs api by @denis-yuen in #211
- Update template with security section by @coverbeck in #212
- rotate bundle by @denis-yuen in #213
- Deleted the zip file once it is unzipped. by @fhembroff in #216
- Added a ToilCompatibleTest class to CLI by @fhembroff in #215
- DOCK-2219: removed upgrade to unstable version message by @hyunnaye in #218
- webservice update for better bitbucket behaviour and new cache strategy for circle-ci by @denis-yuen in #217
- Feature/junit5 by @denis-yuen in #214
- update vfs, hook-up cromwell for progress bar by @denis-yuen in #219
- Display server-url by @KimberleyChong in #220
- Feature/bom update - test optimization by @denis-yuen in #223
- Give Suggestions to User if they Enter an Incorrect Command by @fhembroff in #221
- Made error messages in CLI more user friendly by @fhembroff in #222
- Feature/2309/workflow entryname hosted and apps by @Richard-Hansen in #52
- SEAB-5247: Add MuteForSuccessfulTests extension to CLI by @svonworl in #224
- Fix Incorrect WDL validation by @fhembroff in #225
- CLI Using Beta TRS API - SEAB-5206 by @KimberleyChong in #226
- Corrected Typos found in CLI by @fhembroff in #227
- bom update by @denis-yuen in #228
- Fix Incorrect Help Page and made tests around help pages more robust by @fhembroff in #231
- update docker compose by @denis-yuen in #230
- Moved CWL and WDL to constants by @fhembroff in #232
- Fix Yaml Validation for when testParameterFiles is empty or non-existent by @fhembroff in #233
New Contributors
- @hyunnaye made their first contribution in #204
- @KimberleyChong made their first contribution in #220
Full Changelog: 1.13.1...1.14.0-beta.0
Contributors
coverbeck, denis-yuen, and 7 other contributors
Assets 5
1.13.1
1.13.0
What's Changed
- bump cromwell version and exclude new jackson core by @wshands in #129
- Feature/fix develop build by @Richard-Hansen in #132
- Feature/hmmm upgrades by @denis-yuen in #135
- Bump slackapi/slack-github-action from 1.16.0 to 1.18.0 by @dependabot in #139
- Bump actions/setup-java from 2 to 3.1.1 by @dependabot in #140
- Bump actions/checkout from 2 to 3 by @dependabot in #137
- Bump actions/cache from 1 to 3 by @dependabot in #136
- see if this makes snyk happier by @denis-yuen in #143
- Add sonarcloud scanning and bump POM versions by @david4096 in #144
- trigger lgtm by @denis-yuen in #145
- Add security policy by @david4096 in #149
- Feature/2083/cli info call by @Richard-Hansen in #148
- Bump actions/setup-java from 3.1.1 to 3.2.0 by @dependabot in #147
- reissue gitlab tokens by @denis-yuen in #153
- Remove residual mentions of
--tsvby @amarjandu in #152 - Make test parameter files optional (#4763) by @amarjandu in #155
- Use BOM versions of jackson core etc. by @wshands in #165
- official mvnw by @denis-yuen in #163
- Bump actions/setup-java from 3.2.0 to 3.4.1 by @dependabot in #169
- update bom and generated files by @denis-yuen in #170
- Remove stale configuration instructions by @amarjandu in #154
- Feature/grab bag by @denis-yuen in #173
- Feature/dock 2129/yaml file check by @fhembroff in #161
- Bump slackapi/slack-github-action from 1.18.0 to 1.19.0 by @dependabot in #151
- Removed Liquibase Changeset Message from Output in CircleCI by @fhembroff in #174
- Restore ignored tests by @kathy-t in #176
- Corrected missing space in error message by @fhembroff in #179
- Feature/seab 4525/bitbucket split by @fhembroff in #171
- Parallelism for CLI by @fhembroff in #181
- Update, alphabetize AbstractEntryClient prints by @aofarrel in #180
- update to new token format by @denis-yuen in #182
New Contributors
- @amarjandu made their first contribution in #152
- @fhembroff made their first contribution in #161
- @kathy-t made their first contribution in #176
- @aofarrel made their first contribution in #180
Full Changelog: 1.12.0...1.13.0
Contributors
denis-yuen, amarjandu, and 7 other contributors